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Selaginella moellendorffii

ABSTRACT: A non flowering plant of class Lycopsida that falls between the vascular and nonvascular plants in the evolutionary tree. Its genome is being sequenced by DOE.

PROVIDER: PRJNA13079 | ENA |

REPOSITORIES: ENA

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			Action	DRS
		Other
	SRR26033829_1.fastq.gz	Fastqsanger.gz
	SRR26033830_1.fastq.gz	Fastqsanger.gz
	SRR26033830_2.fastq.gz	Fastqsanger.gz
	SRR26033831_1.fastq.gz	Fastqsanger.gz

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Neolignans from Selaginella moellendorffii.

Project description:Two new neolignans selaginellol (1) and selaginellol 4'-O-β-D-glucopyranoside (2), together with seven known compounds (3-9), were isolated from the whole plant of Selaginella moellendorffii. The structures of the new isolates were determined through spectroscopic data analysis. Compounds 1-9, as well as compounds 10-18 previously isolated from the species, were measured for the activity against platelet aggregation induced by ADP or collagen. Three neoligans (8, 11, and 12), one flavanone (14), and one alkaloid (16) showed inhibitory activity against ADP- or collagen-induced platelet aggregation as compared with tirofiban. The dihydrobenzofuran neolignans (8, 11, and 12) are more potent than the benzofuran neolignan (13) and other types of neolignans (1-7). Glucosidation of the dihydrobenzofuran neolignans (11 and 12) is helpful for the activity. Two new neolignans selaginellol (1) and selaginellol 4'-O-β-D-glucopyranoside (2) were isolated from the whole plant of Selaginella moellendorffii. Several compounds from this plant showed the activity against platelet aggregation induced by ADP or collagen.

| S-EPMC5385659 | biostudies-literature

Selaginella moellendorffii

Project description:Selaginella EST project

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Selaginella moellendorffii

Project description:Selaginella moellendorffii Hieron. T2T genome sequencing and assembly

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Selaginella moellendorffii

Project description:RNA-Sequencing analysis of reproduction/meiosis in Selaginella moellendorffii

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Selaginella moellendorffii

Project description:Selaginella moellendorffii Raw sequence reads

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Selaginella moellendorffii

Project description:Small RNAs from the lycopod Selaginella moellendorffii

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Project description:Selaginella moellendorffii Raw sequence reads

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Project description:Selaginella moellendorfii Genome Sequencing project

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RNA-Sequencing analysis of reproduction/meiosis in Selaginella moellendorffii

Project description:To investigate global gene expression during meiosis in S. moellendorfii, digital gene-expression profiling of a series of sporangia at different developmental stages was performed by Illumina HiSeq™ 2000 sequencing platforms, with young leaves being used as a control. The samples were collected from South Mountain, Chongqing (29°33'44.18"N; 106°37'35.62"E) and stored in RNAlater solution. Total RNAs were extracted using the TRIzol solution. The clean reads were aligned to the genome sequence of S. moellendorfii at JGI database by SOAP2. Gene expression levels were calculated from the number of uniquely aligned clean reads and then normalized into units of Reads Per Kilobase per Million reads mapped (RPKM). Genes were considered to be differentially expressed if they had an FDR < 0.05, P-value < 0.05, and the absolute value of log2Ratio ≥ 1 between reproductive and vegetative samples. As a result, 5416 genes were found to be up-regulated in reproductive/meiotic samples.

2019-06-27 | GSE83783 | GEO

Small RNAs from the lycopod Selaginella moellendorffii

Project description:The small RNAs of Selaginella moellendorffii were sampled by direct pyrosequencing (454 Life Sciences). These data represent microRNAs, siRNAs, and other expressed small RNAs of ~18-~28 nts. in length. Keywords: Small RNA sequencing - high throughput

2007-06-30 | GSE7320 | GEO

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