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Comparing two transcriptome technologies - sequencing match microarrays

ABSTRACT: Comparing two transcriptome technologies - sequencing match microarrays

PROVIDER: PRJNA151341 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR390316_1.fastq.gz	Fastqsanger.gz
	SRR390316_2.fastq.gz	Fastqsanger.gz
	SRR390317_1.fastq.gz	Fastqsanger.gz
	SRR390317_2.fastq.gz	Fastqsanger.gz

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Comparing two transcriptome technologies - sequencing match microarrays

Project description:This SuperSeries is composed of the following subset Series: GSE34461: Comparing two transcriptome technologies - sequencing match microarrays [Array] GSE34477: Comparing two transcriptome technologies - sequencing match microarrays [RNA-Seq] Refer to individual Series

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Project description:Next-generation sequencing has emerged as a promising platform for whole genome transcriptome profiling. The microarray technology has in contrast a long track record, but may suffer from issues related to background fluorescence and non-specific hybridization. The two technologies have been compared for eukaryotic transcriptomes in various studies. However, for prokaryotes information on comparative performance of the two technologies is sparse. We thus compared the two technologies for Streptococcus thermophilus. With just single experiments there was a strong correlation between the technologies.

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Comparing two transcriptome technologies - sequencing match microarrays

Project description:This SuperSeries is composed of the SubSeries listed below.

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Streptococcus thermophilus

Project description:Comparing two transcriptome technologies - sequencing match microarrays [Array]