Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Mankyua chejuensis

ABSTRACT: Mankyua chejuensis overview

PROVIDER: PRJNA156809 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR15435894_1.fastq.gz	Fastqsanger.gz
	SRR15435894_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

Aegista chejuensis

Project description:Aegista chejuensis overview

| PRJNA391015 | ENA

Apodemus chejuensis

Project description:Apodemus chejuensis overview

| PRJNA81447 | ENA

Aegista chejuensis

Project description:Aegista chejuensis Raw sequence reads

| PRJNA298949 | ENA

Aegista chejuensis

Project description:Aegista chejuensis Raw sequence reads

| PRJNA325884 | ENA

Mankyua chejuensis

Project description:Mankyua chejuensis Genome sequencing and assembly

| PRJNA745921 | ENA

Hahella chejuensis

Project description:Exopolysaccharide-producing slightly halophilic bacterium

| PRJNA35809 | ENA

Genomic blueprint of Hahella chejuensis, a marine microbe producing an algicidal agent.

Project description:Harmful algal blooms, caused by rapid growth and accumulation of certain microalgae in the ocean, pose considerable impacts on marine environments, aquatic industries and even public health. Here, we present the 7.2-megabase genome of the marine bacterium Hahella chejuensis including genes responsible for the biosynthesis of a pigment which has the lytic activity against a red-tide dinoflagellate. H.chejuensis is the first sequenced species in the Oceanospiralles clade, and sequence analysis revealed its distant relationship to the Pseudomonas group. The genome was well equipped with genes for basic metabolic capabilities and contained a large number of genes involved in regulation or transport as well as with characteristics as a marine heterotroph. Sequence analysis also revealed a multitude of genes of functional equivalence or of possible foreign origin. Functions encoded in the genomic islands include biosynthesis of exopolysacchrides, toxins, polyketides or non-ribosomal peptides, iron utilization, motility, type III protein secretion and pigmentation. Molecular structure of the algicidal pigment, which was determined through LC-ESI-MS/MS and NMR analyses, indicated that it is prodigiosin. In conclusion, our work provides new insights into mitigating algal blooms in addition to genetic make-up, physiology, biotic interactions and biological roles in the community of a marine bacterium.

| S-EPMC1312362 | biostudies-literature

Hahella chejuensis KCTC 2396

Project description:Exopolysaccharide-producing slightly halophilic bacterium

| PRJNA16064 | ENA

Divergent Patterns of Endogenous Small RNA Populations From Seed and Vegetative Tissues of Glycine max

Project description:An overview of small RNAs sequences existing in seed development and contrasted with vegetative tissues of the soybean

2012-10-09 | GSE36728 | GEO

Tbx6b ChIP-chip on Ciona intestinalis embryo (early gastrula)

Project description:A genomic overview of in vivo binding of a transcription factor Tbx6b in the ascidian early gastrula embryo.

2010-03-09 | GSE17694 | GEO