Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Pseudofrankia sp. DC12

ABSTRACT: Pseudofrankia sp. DC12 Genome sequencing and assembly

PROVIDER: PRJNA157399 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR067866_1.fastq.gz	Fastqsanger.gz
	SRR067866_2.fastq.gz	Fastqsanger.gz
	SRR3926965_1.fastq.gz	Fastqsanger.gz
	SRR3926965_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 11

Similar Datasets

Pseudofrankia sp. BMG5.37

Project description:Pseudofrankia sp. BMG5.37 Genome sequencing and assembly

| PRJNA976355 | ENA

Pseudofrankia sp. EUN1h

Project description:Pseudofrankia sp. strain EUN1h genome sequencing

| PRJNA318442 | ENA

Pseudofrankia

Project description:Pseudofrankia sp. overview

| PRJNA974510 | ENA

Pseudofrankia inefficax

Project description:Pseudofrankia inefficax overview

| PRJNA1205017 | ENA

Pseudofrankia asymbiotica strain:NRRL B-16386

Project description:Pseudofrankia asymbiotica strain:NRRL B-16386 Genome sequencing and assembly

| PRJNA318441 | ENA

Project description:WTCCC2 project Schizophrenia (SP) samples

| EGAD00010000262 | EGA

Pseudofrankia sp. BMG5.36

Project description:Frankia sp. strain BMG5.36 genome sequencing

| PRJNA318448 | ENA

Rabbit limbal epithelial side population (SP) cells and non-SP cells

Project description:Corneal epithelial stem cells reside in the limbus that is the transitional zone between the cornea and conjunctiva, and are essential to maintain the homeostasis of corneal epithelium. However, their characterization is poorly understood. Therefore, we constructed gene expression profiles of limbal epithelial SP and non-SP cell using RNA-sequencing. As a result, limbal epithelial SP cells have immature cell phenotypes with endothelial/mesenchymal cell markers, while limbal epithelial non-SP cells have epithelial progenitor cell markers.

2016-04-18 | GSE79620 | GEO

Gene expression analysis of four conditions for Puccinia graminis f. sp. tritici

Project description:Puccinia graminis f. sp. tritici is the cause of wheat stem rust. A microarray was designed from genes predicted from the P. graminis f. sp. tritici genome assembly, and gene expression measured for four conditions which include wheat or barley infecting growth stages initiated by urediniospores. mRNA was prepared from fresh urediniospores, uredinospores germinated for 24 hr, wheat seedlings infected with urediniospores for 8 days, and barley seedlings infected with urediniospores for 8 days. The asexual uredinial infection cycle on wheat produces additional urediniospores, which can start new cycles of wheat infection and are readily spread by aerial transport. This expression data is further described in Duplessis et al, Obligate Biotrophy Features Unraveled by the Genomic Analysis of the Rust Fungi, Melampsora larici-populina and Puccinia graminis f. sp. tritici

2010-12-31 | GSE25020 | GEO

Expression data from SP and non-SP sorted anti-EpCAM treated A549 cells

Project description:Targeted therapies against cancer stem cells which are enriched in side populations (SP) involves interruption of Wnt-signalling. Furthermore, EpCAM is a SP marker and modulator of Wnt-signalling. Therefore, the effects of an anti-EpCAM treatment on SP-cells and WNT/β-catenin signalling was studied. SP of the human lung adenocarcinoma cell line A549 was obtained by fluorescence activated cell sorting and whole genome scans helped to define their molecular phenotype after anti-EpCAM antibody treatment.

2012-08-08 | GSE31315 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data