Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Acinetobacter baylyi

ABSTRACT: Acinetobacter baylyi overview

PROVIDER: PRJNA168553 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR10336275_1.fastq.gz	Fastqsanger.gz
	SRR10336275_2.fastq.gz	Fastqsanger.gz
	SRR10336276_1.fastq.gz	Fastqsanger.gz
	SRR10336276_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 219

Similar Datasets

Acinetobacter baylyi

Project description:Acinetobacter baylyi Proteome

| PRJNA549090 | ENA

RNA sequencing of Acinetobacter baylyi and E. coli while co-incubating on LB agar plates

Project description:The bacterial type VI secretion system is a widespread secretion mechanism important for competition in many Gram-negative bacteria. Killing and lysing of competing bacteria can provide advantages such as nutrients or acquisition of new genes by DNA uptake. Here, we show that T6SS-dependent lysis of prey cells by the naturally competent Acinetobacter baylyi results in extensive filamentation of a significant subpopulation of A. baylyi cells. This is dependent on the release of genomic DNA from the lysed prey cells and its uptake by the competence system of A. baylyi. Single-cell level analysis using live-cell imaging shows that filamentous A. baylyi cells appear at the interface between the species. The analysis of A. baylyi transcriptome and the response of transcriptional reporters suggest that the uptake of genomic DNA results in a highly upregulated SOS response, which often leads to the cell division arrest. Using competition experiments, we show that the parental strain is outcompeted by a strain lacking the DNA uptake machinery because such mutant shows no SOS response-dependent cell division arrest. Our data suggest that the cost of SOS-response may drive selection of decreased DNA uptake in T6SS positive bacteria.

2019-12-20 | GSE136239 | GEO

Acinetobacter baylyi strain:Luc011

Project description:Acinetobacter baylyi strainLuc011

| PRJNA924949 | ENA

Acinetobacter baylyi BD4

Project description:Acinetobacter baylyi BD4 Genome Sequencing

| PRJNA168473 | ENA

Acinetobacter baylyi strain:SORGH_AS893

Project description:Acinetobacter baylyi SORGH_AS893 genome sequencing

| PRJNA957343 | ENA

Proteomic analysis of Acinetobacter baylyi ADP1 under exposure of disinfectants

Project description:The goals of this study are to use SWATH-MS to detect bacterial proteomic profiles of wild-type Acinetobacter baylyi ADP1, and its protein response under the exposure of disinfectants, including chloramine and free chlorine. The concentrations of disinfectants were 10 mg/L. The group without dosing disinfectant was the control group. Each concentration was conducted in triplicate. By comparing the proteomic profiles of experimental groups and control group, the effects of disinfectants on translational levels can be revealed.

2021-09-09 | PXD016794 | Pride

Acinetobacter baylyi strain:JAT2091

Project description:Acinetobacter baylyi strain:JAT2091 Genome sequencing

| PRJNA880735 | ENA

Acinetobacter baylyi strain:JAT2044

Project description:Acinetobacter baylyi strain:JAT2044 Genome sequencing

| PRJNA880739 | ENA

Proteomic analysis of Acinetobacter baylyi ADP1 under exposure to artificial sweeteners

Project description:The goals of this project are to use a liquid chromatography-tandem mass spectrometer (LC-MS/MS) to detect bacterial proteomic profiles of Acinetobacter baylyi ADP1 and their quantitative protein responses under exposure to 30 mg/L of artificial sweeteners (saccharine, sucralose, aspartame, and acesulfame potassium). The control group without artificial sweeteners exposure was also set up for comparison. Each treatment was conducted in biological triplicate. By comparing the proteomic profiles of artificial sweeteners-treated groups and control group, the effects of artificial sweeteners on bacterial translational levels can be revealed.

2022-02-17 | PXD027117 | Pride

Acinetobacter baylyi strain:SORGH_AS 887

Project description:Acinetobacter baylyi SORGH_AS 887 genome sequencing

| PRJNA957358 | ENA