Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Trichophyton rubrum MR850

ABSTRACT: sequencing of Trichophyton

PROVIDER: PRJNA186826 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	AOKR01.dat.gz	Other
	AOKR01.fasta.gz	Fasta.gz
	AOKR01.master.dat	Other
	SRR825184_1.fastq.gz	Fastqsanger.gz
	SRR825184_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 8

Similar Datasets

Trichophyton rubrum germination study

Project description:Conidia are considered to be the primary cause of skin and nail infections by Trichophyton rubrum. A cDNA microarray containing 10112 ESTs was developed and used to estimate the relative gene expression levels and changes of gene expression during conidial germination in time-course experiments. Keywords: time course

2007-03-27 | GSE5083 | GEO

Dermatophytes CGH based on a Trichophyton rubrum cDNA microarray

2010-05-04 | GSE7909 | GEO

Trichophyton rubrum MR1448

Project description:sequencing of Trichophyton

| PRJNA186836 | ENA

Trichophyton rubrum MR1463

Project description:sequencing of Trichophyton

| PRJNA186837 | ENA

Trichophyton rubrum MR1459

Project description:sequencing of Trichophyton

| PRJNA186839 | ENA

Trichophyton rubrum

Project description:Trichophyton rubrum Genome sequencing and assembly

| PRJNA673795 | ENA

Trichophyton rubrum

Project description:Trichophyton rubrum germination study

| PRJNA95383 | ENA

Global transcription profiles of Trichophyton rubrum in response to Flucytosine

Project description:A cDNA microarray was constructed from the expressed sequence tags (ESTs) of different developmental stages, and transcriptional profiles of the responses to 5-Flucytosine were determined. Keywords: Expression profiling by array The expression profiles of Trichophyton rubrum treated with 5-Flucytosine were compared to those of Trichophyton rubrum without drug. Each treatment has three replicates.

2010-05-19 | E-GEOD-12861 | biostudies-arrayexpress

Dermatophytes CGH based on a Trichophyton rubrum cDNA microarray

Project description:A cDNA microarray was constructed from the expressed sequence tags (ESTs) of different developmental stages, and comparative genome hybridization based on microarray procedures were carried out. Dermatophyte species are classified into three genera: Epidermophyton, Microsporum, and Trichophyton. To determine the relationship between these three groups comparative genome hybridization were used in our experiment. Trichophyton rubrum genmic DNA was reference DNA and labelled by Cy3 while the other dermatophytes genomic DNA were test DNA and labelled by CY5. Test and reference DNA were co-hybridized with the T. rubrum cDNA microarray and the numbers of genes shared between each species and T. rubrum were determined. Keywords: Comparative Genomic Hybridization We used a Trichophyton rubrum cDNA microarray prepared in our lab through comparative genome hybridization of genomic DNA of 21 dermatophyte strains (belonging to 20 species) to elucidate the taxonomy and evolution profiles of 20 dermatophyte species. The numbers of genes shared between each species and T. rubrum were determined. Each strain DNA hybridized for 3 times. The slides were separated into three groups base on different datasets.

2010-05-03 | E-GEOD-7909 | biostudies-arrayexpress

Trichophyton rubrum CBS 289.86

Project description:sequencing of Trichophyton

| PRJNA186830 | ENA