Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Tursiops truncatus

ABSTRACT: bottlenosed dolphin

PROVIDER: PRJNA20365 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	DRR513289_1.fastq.gz	Fastqsanger.gz
	DRR513289_2.fastq.gz	Fastqsanger.gz
	DRR513290_1.fastq.gz	Fastqsanger.gz
	DRR513290_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 848

Similar Datasets

Tursiops truncatus

Project description:Wild dolphin PBL analysis

| PRJNA107797 | ENA

Tursiops truncatus

Project description:Profiling of Dolphin Skin Cells

| PRJNA94423 | ENA

Blood Transcriptome analysis of wild common bottlenose dolphins (Tursiops truncatus) from the South-East of the United States

Project description:To validate the oligo array and to investigate the impact of the environmental stressors on dolphin health at transcriptomic level

2014-03-26 | GSE50684 | GEO

Tursiops truncatus

Project description:TRANSCRIPTOMIC ANALYSIS OF BOTTLENOSE DOLPHIN (Tursiops truncatus) SKIN BIOPSIES TO ASSESS THE EFFECTS OF EMERGING CONTAMINANTS ON A TOP PREDATOR IN THE MEDITERRANEAN SEA

| PRJNA287127 | ENA

Tursiops truncatus isolate:mTurTru1

Project description:Tursiops truncatus (bottlenose dolphin) genome, mTurTru1, paternal haplotype

| PRJNA561884 | ENA

Tursiops truncatus isolate:mTurTru1

Project description:Tursiops truncatus (bottlenose dolphin) genome, mTurTru1, maternal haplotype

| PRJNA561885 | ENA

Blood Transcriptome analysis of wild common bottlenose dolphins (Tursiops truncatus) from the South-East of the United States

Project description:To validate the oligo array and to investigate the impact of the environmental stressors on dolphin health at transcriptomic level Collection of blood samples from wild animals in 4 different geographic locations of the South East of the United States

2014-03-26 | E-GEOD-50684 | biostudies-arrayexpress

TRANSCRIPTOMIC ANALYSIS OF BOTTLENOSE DOLPHIN (Tursiops truncatus) SKIN BIOPSIES TO ASSESS THE EFFECTS OF EMERGING CONTAMINANTS ON A TOP PREDATOR IN THE MEDITERRANEAN SEA

Project description:To assess the impact of emerging contaminats on dolphin transcriptome

2016-02-01 | GSE69917 | GEO

Tursiops truncatus isolate:mTurTru1

Project description:Tursiops truncatus (bottlenose dolphin) genome, mTurTru1, maternal haplotype with Y

| PRJNA608726 | ENA

Identifcation of Adiponectin and Evidence for Post-Translational Modifications in the Bottlenose Dolphin (Tursiops truncatus)

Project description:A Multiple Affinity Removal System (MARS) Human 14 spin cartridge was used to deplete a dolphin serum which was then digested with trypsin and analyzed without prior fractionation by nanoLC-MS/MS. These files are associated with "2011-9-25_Neely-DolphinSerum." Data analysis: raw data generated by the AB Sciex 5600 were converted to a peak list using the AB Sciex MS Data Converter (v. 1.1 beta, July 2011). Protein identifications were made using Mascot (v. 2.3.02) searching against the Ensembl (release 64) turTru1 dolphin genome assembly protein database [16,598 sequences] and the common Repository of Adventitious Proteins database (cRAP; 2012.01.01; the Global Proteome Machine) using the following parameters: trypsin was selected as the enzyme and three missed cleavages were allowed; carbamidomethylation (Cys) was specified as a fixed modification; glucosylgalactosyl (Lys), oxidation (Met, Pro), and 2-succinyl (Cys) were specified as variable modifications; a precursor tolerance of 10 ppm and fragment ion tolerance of 0.5 Da; instrument type was ESI-QUAD-TOF. Additionally, a non-depleted dolphin sera that had been digested followed by quasi-fractionation using SPE, was analyzed by nano-LC-MS/MS which lead to an additional peptide identification, KGEPGESAYVYR, and these files are associated with "2012-12-12 Dolphin IDA".

2013-09-23 | PXD000431 | Pride

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data