Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Penicillium roqueforti strain:UASWS P1

ABSTRACT: Penicillium roqueforti strain:UASWS P1 Genome sequencing and assembly

PROVIDER: PRJNA239656 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	JNNS01.dat.gz	Other
	JNNS01.fasta.gz	Fasta.gz
	JNNS01.master.dat	Other
	SRR1791590_1.fastq.gz	Fastqsanger.gz
	SRR1791590_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 6

Similar Datasets

Impact of maturation and growth temperature on transcription profiles of Penicillium roqueforti conidia

Project description:Purpose: The goal of this study is to compare differences between Penicillium roqueforti conidia from various conditions shown to affect heat-resistance to identify genes possibly related to heat-resistance using RNA-seq. Methods: mRNA from Penicillium roqueforti conidia produced at different temperatures (15C, 25C or 30C) and different cultivation times (3, 5, 7 or 10 days) was extracted, in triplicate, and sequenced with Illumina NextSeq500. The sequence reads that passed quality filters were analyzed using Hisat2 followed by Cufflinks. Results: we mapped about 19 million sequence reads per sample to the Penicillium roqueforti genome (build LCP96 04111) and identified 9723 transcripts in the conidia. Data analysis revealed a subset of 33 genes showing increased expression in culture conditions that increase heat-resistance. Conclusions: Our study generated insight into multiple genes that are likely involved in the heat-resistance of Penicillium roqueforti.

2020-04-24 | GSE149235 | GEO

Penicillium roqueforti

Project description:Penicillium roqueforti Genome sequencing

| PRJNA1079247 | ENA

Penicillium roqueforti

Project description:Penicillium roqueforti overview

| PRJNA240910 | ENA

Penicillium roqueforti

Project description:Genome sequencing of Penicillium roqueforti

| PRJDB12667 | ENA

Penicillium roqueforti strain:LCP96 04111

Project description:Penicillium roqueforti strain:LCP96 04111 Genome sequencing and assembly