Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Treponema porcinum strain:ATCC BAA-908

ABSTRACT: Treponema porcinum strain:ATCC BAA-908 Genome sequencing

PROVIDER: PRJNA245589 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR4090628_1.fastq.gz	Fastqsanger.gz
	SRR4090628_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

Project description:Treponema porcinum ATCC BAA-908

| PRJEB19554 | ENA

Treponema berlinense strain:ATCC BAA-909

Project description:Treponema berlinense strain:ATCC BAA-909 Genome sequencing

| PRJNA245587 | ENA

dRNA-Seq data for Vibrio campbellii BB120 (ATCC BAA-1116, previously designated as Vibrio harveyi)

Project description:Differential RNA-Seq data for Vibrio campbellii BB120 (ATCC BAA-1116, previously designated as Vibrio harveyi)

2024-07-15 | GSE182898 | GEO

Bifidobacterium porcinum

Project description:Bifidobacterium porcinum overview

| PRJNA1041935 | ENA

RNA-seq analysis of Helicobacter cinaedi ATCC BAA-847 under microaerobic and aerobic culture conditions

Project description:Helicobacter cinaedi is an emerging bacterial pathogen of immunosuppressed individuals. The species is traditionally thought to require an H2-enhanced microaerobic atmosphere for growth, although it can proliferate under aerobic conditions when co-cultured with epithelial monolayers or supplemented with certain metabolites (notably, L-lactate). The goal of this experiment was to assess the global transcription changes that occur in the H. cinaedi type strain (ATCC BAA-847) under various media and atmospheric conditions. These include bacterial monoculture, as well as co-culture with Caco-2 intestinal epithelial cells. In total, Illumina mRNA-seq (stranded, paired-end) was performed on H. cinaedi grown under 9 in vitro culture conditions (4-5 biologic replicates per condition).

2016-09-19 | E-MTAB-5062 | biostudies-arrayexpress

Caldimonas manganoxidans ATCC BAA-369

Project description:Caldimonas manganoxidans ATCC BAA-369

| PRJNA182454 | ENA

Oceanimonas smirnovii ATCC BAA-899

Project description:Oceanimonas smirnovii ATCC BAA-899

| PRJNA185294 | ENA

Colwellia piezophila ATCC BAA-637

Project description:Colwellia piezophila ATCC BAA-637

| PRJNA182419 | ENA

Enterobacter kobei ATCC BAA-260 isolate:ATCC BAA-260

Project description:Enterobacter kobei ATCC BAA-260 genome sequencing

| PRJNA332046 | ENA

A proteome reference map of the wine lactic acid bacterium Oenococcus oeni ATCC BAA-1163

Project description:Oenococcus oeni is the main lactic acid bacterium that carries out the malolactic fermentation in virtually all red wines and in some white and sparkling wines. O. oeni possesses an array of metabolic activities which can modify the taste and aromatic properties of wine. There is therefore industrial interest in the proteins involved in these metabolic pathways and related transport systems of this bacterium. In this work, we report the characterization of the O. oeni ATCC BAA-1163 proteome. Total and membrane protein preparations from O. oeni were standardized and analyzed by two-dimensional gel electrophoresis. Using tandem mass spectrometry we identified 226 different polypeptides corresponding to 155 unique proteins, which have been classified by their putative function and subjected to bioinformatics analysis.

2014-04-16 | PXD000579 | Pride

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data