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Arachis

ABSTRACT: Arachis (peanut, groundnut) species, both cultivated and wild species Transcriptome or Gene expression

PROVIDER: PRJNA248910 | ENA |

REPOSITORIES: ENA

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Dataset's files

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			Action	DRS
	SRR1535034_1.fastq.gz	Fastqsanger.gz
	SRR1535034_2.fastq.gz	Fastqsanger.gz
	SRR1535035_1.fastq.gz	Fastqsanger.gz
	SRR1535035_2.fastq.gz	Fastqsanger.gz
	SRR1534396_1.fastq.gz	Fastqsanger.gz

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Project description:Peanut (Arachis hypogaea) has a large (~2.7 Gbp) allotetraploid genome with closely related component genomes making its genome very challenging to assemble. Here we report genome sequences of its diploid ancestors (A. duranensis and A. ipaÃ«nsis). We show they are similar to the peanutâs A- and B-genomes and use them use them to identify candidate disease resistance genes, create improved tetraploid transcript assemblies, and show genetic exchange between peanutâs component genomes. Based on remarkably high DNA identity and biogeography, we conclude that A. ipaÃ«nsis may be a descendant of the very same population that contributed the B-genome to cultivated peanut. Whole Genome Bisulphite Sequencing of the peanut species Arachis duranensis and Arachis ipaensis.

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