Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Solanum tuberosum

ABSTRACT: Dynamics of tolerant potato-potato virus Y interaction

OTHER RELATED OMICS DATASETS IN: PXD015221

PROVIDER: PRJNA252955 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

PLRV co-immunoprecipitation from Solanum tuberosum

Project description:Phloem localization of plant viruses is advantageous for acquisition by sap-sucking vectors but hampers host-virus protein interaction studies. In this study, Potato leafroll virus (PLRV)-host protein complexes were isolated from systemically infected potato, a natural host of the virus. Comparing two different co-immunoprecipitation support matrices coupled to mass spectrometry, we identified 44 potato proteins and one viral protein (P1) specifically associated with virus isolated from infected phloem. An additional 142 proteins interact in complex with virus at varying degrees of confidence. Greater than 80% of these proteins were previously found to form high confidence interactions with PLRV isolated from the model host Nicotiana benthamiana. Bioinformatics revealed that these proteins are enriched for functions related to plasmodesmata, organelle membrane transport, translation and mRNA processing. Our results show that model system proteomics experiments are extremely valuable for understanding protein interactions regulating infection in recalcitrant pathogens such as phloem-limited viruses.

2016-12-14 | PXD004814 | Pride

Transcriptomes profile of Solanum tuberosum (St) and Solanum commersonii (Sc) under cold stress and AtCBF3 overexpression.

Project description:St (common potato) is a freezing sensitive species unable to cold acclimate. The close wild relative Sc is freezing tolerant and able to cold acclimate. Here we compare the cold transcriptome of these two species with different levels of freezing tolerance. We also identify the putative CBF regulons by comparing the transcriptomes of wild type plants with that of 35S::AtCBF3 transgenic lines in both species.

2011-05-01 | GSE22449 | GEO

Solanum tuberosum

Project description:Potato virus Y infection hinders potato defence response and renders plants more vulnerable to Colorado potato beetle attack

| PRJNA242936 | ENA

Solanum tuberosum

Project description:Plant genes affected by Solanum tuberosum and Colorado potato beetle interaction

| PRJNA101205 | ENA

Solanum tuberosum

Project description:Aggressive Potato virus YNTN (PVYNTN) and mild PVYN isolates trigger different specific responses in susceptible potato

| PRJNA119511 | ENA

Solanum tuberosum

Project description:Early response of potato plants to virus (PVY-NTN) inoculation