Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Drosophila melanogaster

ABSTRACT: Su(H) early embryonic ChIP-seq

PROVIDER: PRJNA256068 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR1524300.fastq.gz	Fastqsanger.gz
	SRR1524301.fastq.gz	Fastqsanger.gz
	SRR1524302.fastq.gz	Fastqsanger.gz
	SRR1524303.fastq.gz	Fastqsanger.gz
	SRR1524297.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 7

Similar Datasets

Drosophila melanogaster

Project description:ChIP-chip from Kc cells with Su(H) antibodies after 30 minutes Notch activation

| PRJNA185417 | ENA

Drosophila melanogaster

Project description:Genomic distribution of dBigH1 in early embryos [ChIP-Seq]

| PRJNA401902 | ENA

Drosophila melanogaster

Project description:Su(H) bound regions in Su(H) induced wing-disc hyperplasia

| PRJNA176931 | ENA

Drosophila melanogaster

Project description:Tissue specific Pol II Chip-Seq in the early fly embryo

| PRJNA153345 | ENA

Su(H) ChIP-on-chip of Notch-stimulated overgrowing Drosophila melanogaster wing imaginal discs

Project description:Aim: Su(H) chromatin occupancy profiling by ChIP on larval wing imaginal discs of Drosophila melanogaster to study the cooperation between Notch activation and loss of epithelial polarity (scrib mutation) during neoplastic growth. Results: The combination of Notch activation and scribble mutation (NS) does not lead to a general redeployment of Su(H) binding as compared to individual conditions (Notch only (N), and scrib mutation only (S))

2021-10-08 | GSE185490 | GEO

Drosophila melanogaster

Project description:Dynamic regulation of chromatin signatures during Drosophila embryonic glial differentiation [ChIP-Seq]

| PRJNA325733 | ENA

Genome-wide binding profiles of Drosophila melanogaster insulator proteins in Kc and Mbn2 cells

Project description:ChIP-chip experiments with NimbleGen whole-genome tiling arrays to compare Su(Hw), dCTCF, BEAF, and CP190 localization on DNA in Kc and Mbn2 cells revealed that BEAF is a third subclass of CP190-containing insulators. The DNA binding proteins, Su(Hw), dCTCF, and BEAF show unique distribution patterns with respect to the location and expression level of genes, suggesting diverse roles for these three subclasses of insulators in genome organization. Notably, cell line specific localization sites for all three DNA binding proteins as well as CP190 indicate multiple levels at which insulators can be regulated to affect gene expression.

2009-05-15 | GSE15661 | GEO

Drosophila melanogaster

Project description:Su(Hw) and Shep RIP-seq in Kc and BG3 cell lines

| PRJNA241258 | ENA

Genome-wide analysis of Su(var)3-9 distribution in chromosomes of Drosophila melanogaster

Project description:Histone modifications represent one of the key factors contributing to proper genome regulation. One of the histone modifications involved in gene silencing is H3K9 methylation, which is found in the chromosomes across different eukaryotes and controlled by SU(VAR)3-9 and its orthologs. Although SU(VAR)3-9 was discovered over two decades ago, little is known about the details of its chromosomal distribution pattern. To fill in this gap, we used DamID-seq approach and obtained high-resolution genome-wide profiles for SU(VAR)3-9 in two somatic and two germline tissues of fruitfly.

2017-04-04 | GSE97351 | GEO

RNA expression in Drosophila melanogaster mutants lacking HP1a

Project description:mRNA expression levels were determined by NGS for wildtype larvae as well as for larvae lacking HP1a [Su(var)205^04/Su(var)205^05 transheterozygotes].

2012-09-01 | GSE39083 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data