Hypothenemus hampei
Ontology highlight
ABSTRACT:
PROVIDER: PRJNA261524 | ENA |
REPOSITORIES: ENA
Similar Datasets
Project description:Hypothenemus hampei Transcriptome or Gene expression
| PRJNA489192 | ENA
Project description:Hypothenemus hampei isolate:ME-2024 Genome sequencing
| PRJNA1110552 | ENA
Project description:Hypothenemus hampei (Cenicafe-colony) Genome Sequences
| PRJNA626647 | ENA
Project description:Hypothenemus hampei isolate:Beltsville Coffee Borer Beetle colony Genome sequencing and assembly
| PRJNA279497 | ENA
Project description:Exclusion nets are increasingly being used to protect a variety of agricultural crops from insect pests as a sustainable alternative to chemical controls. We examined the efficacy of exclusion nets in controlling the world's most damaging insect pest of coffee, Hypothenemus hampei (coffee berry borer), on two small-scale coffee farms on Hawai'i Island. We recorded microclimate data, fruit infestation, population per fruit, sex ratio, mortality by Beauveria bassiana, coffee yield and quality in four paired exclusion and control (un-netted) plots on both farms. Mean and maximum daily temperature and relative humidity were similar between treatments, while mean and maximum daily solar radiation was reduced by ~50% in exclusion plots. Green and ripe fruit from exclusion plots had significantly lower infestation compared to un-netted control plots at both farms. We observed no significant difference between exclusion and control plots in the number of CBB per fruit or the female:male sex ratio. CBB mortality was significantly higher in control relative to exclusion plots in one of the two farms. Ripe fruits harvested from exclusion plots were on average significantly heavier and wider than those from control plots; however, there was no significant difference in the average yield per tree between treatments. Lastly, coffee quality was not significantly different between control and exclusion plots. Our results suggest that with complete sanitation prior to net installation in an environment where CBB is actively circulating, exclusion netting can successfully control CBB on small-scale coffee farms without reducing coffee yield or quality, and has the potential to lower production and labor costs by eliminating the need to spray pesticides.
| S-EPMC7348803 | biostudies-literature
Project description:The coffee berry borer (CBB) Hypothenemus hampei was first described in Africa in 1867 and has spread to all major coffee-producing regions worldwide, including Jamaica. Using long-read sequencing, we produced a new high-quality reference genome (172.7 Mb) for the Jamaican strain of the CBB, with 93% of the genome assembled into 14 scaffolds. Whole genome sequencing of pooled samples from different populations across Jamaica showed that the CBB harbors low levels of genetic diversity alongside an excess of low-frequency alleles, indicative of a recent genetic bottleneck. The analyses also showed a recent surge in the activity of transposable elements (TEs), particularly LINE/R1 and LTR/Gypsy elements, within CBB populations. Our findings offer first insights into the evolutionary genomics of CBB populations in Jamaica, highlighting the potential role of TEs in shaping the genome of this important pest species.
| S-EPMC11529894 | biostudies-literature
Project description:Coffee berry borer (CBB) is considered the most damaging insect pest of coffee worldwide. CBB was first detected on Hawai'i Island in 2010, and quickly spread throughout the state's coffee-growing regions. With the introduction of this pest, Hawaii's small yet economically important coffee industry was changed forever with growers facing significantly higher production and labor costs, as well as decreased yield and coffee quality. We assessed the economic benefits of managing CBB based on three strategies that emerged in Hawaii over the last decade: (1) the use of the entomopathogenic fungus Beauveria bassiana alone, (2) early integrated pest management (IPM), which combined monitoring and sanitation with spraying B. bassiana, and (3) research-based IPM, which focused on CBB biology in Hawaii, optimization of monitoring, B. bassiana applications, and cultural controls. From 2011 to 2021, the economic benefits from managing CBB were USD 52 million using B. bassiana alone, USD 69 million from early IPM, and USD 130 million from research-based IPM, for a total of USD 251 million from all management. Our findings suggest that all types of management provide economic benefits to Hawaii growers, but management strategies based on Hawaii-specific research have provided the greatest gains in coffee yield, price, and revenue.
| S-EPMC10143774 | biostudies-literature
Project description:Traditionally, the study of anatomy in insects has been based on dissection techniques. Micro-computed tomography (micro-CT) is an X-ray based technique that allows visualization of the internal anatomy of insects in situ and does not require dissections. We report on the use of micro-CT scans to study, in detail, the internal structures and organs of the coffee berry borer (Hypothenemus hampei), the most damaging insect pest of coffee worldwide. Detailed images and videos allowed us to make the first description of the aedeagus and the first report of differences between the sexes based on internal anatomy (flight musculature, midgut shape, hindgut convolutions, brain shape and size) and external morphology (lateral outline of the pronotum and number of abdominal tergites). This study is the first complete micro-CT reconstruction of the anatomy of an insect and is also the smallest insect to have been evaluated in this way. High quality rendered images, and additional supplementary videos and 3D models are suitable for use with mobile devices and are useful tools for future research and as teaching aids.
| S-EPMC6868283 | biostudies-literature
Project description:The coffee industry loses millions of dollars annually worldwide due to the Coffee Berry Borer (CBB); these losses imply a decrease in quality and production. Traps are used to monitor their flight and for pest control. The main objective of this study was to determine the capture pattern and trap capture percentages of the CBB population over time using column traps (CTs) in two independent field experiments. CTs were composed of four traps installed at four different heights 0.5, 1.5, 2.5, and 3.5 m above ground. Our results demonstrated a significant difference in CBB capture by traps placed at different heights above the ground. The CT capture maintained a pattern throughout this study's lag: the lower the height, the greater the percentage of CBBs captured. The study was conducted in two independent experiments (A and B). In Experiment A and B, the traps placed at 0.5 m caught 67% and 85% of the CBBs captured, respectively. Furthermore, the trap set at 1.5 m above the ground in the multi-level CT showed a higher capture percentage than the single placed trap (ST, also at 1.5 m about ground). The pattern of the capture and proportion of the CBB in the CTs was maintained throughout the study despite the season, changes in temperature, and relative air humidity. We suggest that CTs could be explored as a useful tool for capturing the CBB, considering its monitoring and management.
| S-EPMC8305300 | biostudies-literature