Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Ustilago maydis

ABSTRACT: Coordinate regulation of ammonium transporters and components of the mating and pathogenic programs in Ustilago maydis

PROVIDER: PRJNA272667 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR1760712_1.fastq.gz	Fastqsanger.gz
	SRR1760712_2.fastq.gz	Fastqsanger.gz
	SRR1760713_1.fastq.gz	Fastqsanger.gz
	SRR1760713_2.fastq.gz	Fastqsanger.gz
	SRR1760714_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 16

Similar Datasets

Transcription factor Rbf1 is the master regulator for b-mating type controlled pathogenic development in Ustilago maydis

Project description:This SuperSeries is composed of the following subset Series: GSE18750: Controlled expression of compatible and incompatible combinations of Ustilago maydis b-mating type locus genes bE and bW GSE18754: Effect of rbf1 deletion during controlled expression of of Ustilago maydis b-mating type locus genes bE1 and bW2 GSE18756: Rbf1 induced gene expression in Ustilago maydis Refer to individual Series

2010-06-01 | E-GEOD-18881 | biostudies-arrayexpress

Maize gene expression during infection with Ustilago maydis

2008-03-01 | GSE10023 | GEO

Rbf1 induced gene expression in Ustilago maydis

Project description:In the phytopathogenic Basidiomcete Ustilago maydis, sexual and pathogenic development are tightly connected and controlled via the b-mating type locus. The b-mating type locus encodes two homeodomain transcription factors, bE and bW, which form an active heterodimeric complex when they are derived from different b-alleles. Rbf1 encodes a zinc-finger transcription factor that is expressed upon formation of an active bE/bW heterodimer. To identify gene regulated by rbf1 independently from b, the b mating type locus was replaced by a copy of rbf1 under control of the arabinose-inducible crg1 promoter (strain CP27). Samples were taken 5h after induction of rbf1 gene expression. Strain JB2, carrying a deletion of the b-locus, was used as control.

2010-06-01 | GSE18756 | GEO

Transcription profiling of maizeduring infection with Ustilago maydis

Project description:The fungal pathogen Ustilago maydis establishes a biotrophic relationship with its host plant maize. Hallmarks of the disease are large plant tumors in which fungal proliferation occurs. Plants have developed various defense pathways to cope with pathogens. We used microarrays to detail the global programme of gene expression during the infection process of Ustilago maydis in its host plant to get insights into the defense programs and the metabolic reprogramming needed to supply the fungus with nutrients. Experiment Overall Design: In three independent experiments plants were infected with the solopathogenic U. maydis strain SG200. Samples from infected leaves were taken at 12 and 24 hours post infection, as well as 2, 4 and 8 days post infection. Samples from uninfected control plants were taken at the same time points.

2008-04-07 | E-GEOD-10023 | biostudies-arrayexpress

mRNA profiling in Ustilago maydis under RUS (repopulation/regrowth under starvation)

Project description:mRNAs comparison between Ustilago maydis wild type grown in diluted YEPS (control) and in cell-free supernatants of Ustilago maydis wild type treated with H202 in two different concentrations (0.4% and 0.7%).

2022-06-16 | GSE205897 | GEO

Transcriptional analysis of the adaptation of Ustilago maydis to grow under nitrogen fixation conditions

Project description:In this study we show the transcriptional analysis after shifting the Ustilago maydis from media with ammonium as a nitrogen source to media lacking ammonium. From these, 49 genes were up-regulated and 41 were down-regulated. The functional description and gene ontology terms associated to the diferentially expressed genes revealed that various key pathways were represented, including, secondary metabolism, the metabolism of nitrogen, amino acid, fatty acid and amino sugar, among others, suggesting that the interplay of U. maydis with its N2 fixing bacterial endosymbiont is a flexible process that may be active during the adaptation to the fungus to the different nitrogen sources, and possibly during its pathogenic style of life.

2017-04-25 | GSE89625 | GEO

Ustilago maydis

Project description:Ustilago maydis Genome sequencing and assembly

| PRJNA506543 | ENA

Ustilago maydis

Project description:Rbf1 induced gene expression in Ustilago maydis

| PRJNA123825 | ENA

Ustilago maydis

Project description:Controlled expression of compatible and incompatible combinations of Ustilago maydis b-mating type locus genes bE and bW

| PRJNA123839 | ENA

Ustilago maydis

Project description:Effect of rbf1 deletion during controlled expression of Ustilago maydis b-mating type locus genes bE1 and bW2