Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Wolbachia endosymbiont of Dactylopius coccus strain:wDacB

ABSTRACT: Wolbachia endosymbiont of Dactylopius coccus strain:wDacB Genome sequencing and assembly

PROVIDER: PRJNA274698 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Wolbachia endosymbiont of Dactylopius coccus

Project description:Wolbachia endosymbiont of Dactylopius coccus overview

| PRJNA275025 | ENA

Wolbachia endosymbiont of Dactylopius coccus strain:wDacA

Project description:Wolbachia endosymbiont of Dactylopius coccus strain:wDacA Genome sequencing and assembly

| PRJNA274701 | ENA

Tissue-Specific Transcriptomics and Proteomics of a Filarial Nematode and its Wolbachia Endosymbiont

Project description:We sequenced total RNA from Dirofilaria immitis in order to generate the first tissue-specific gene expression profile of a filarial nematode and its Wolbachia endosymbiont.

2016-06-01 | GSE67894 | GEO

Tissue-Specific Transcriptomics and Proteomics of a Filarial Nematode and its Wolbachia Endosymbiont

Project description:We sequenced total RNA from Dirofilaria immitis in order to generate the first tissue-specific gene expression profile of a filarial nematode and its Wolbachia endosymbiont. Examination of transcript levels in 7 different Dirofilaria immitis tissues, in duplicate, using Illumina GAIIx.

2016-06-01 | E-GEOD-67894 | biostudies-arrayexpress

Identification of cross-species microRNA-based Communication in Brugia malayi with its endosymbiont Wolbachia

Project description:Brugia malayi is a parasitic nematode that causes lymphatic filariasis in humans. A total of 178 novel microRNA were identified from short read transcriptional data, which when combined with known Brugia microRNAs yielded a total of 284 microRNA. Of these, 123 microRNA sequences (43%) are differentially expressed over the mammalian life stages of B. malayi that we examined. Putative targets of these microRNA were identified from inversely expressed target clusters that contain valid seed sequences for the corresponding microRNAs. The largest identified cluster is downregulated in adult females and enriched in zinc finger domains, helicase domains, and DNA binding domains suggesting this microRNA cluster may have regulatory control over a large proportion of adult female specific mRNA genes. MicroRNA-like molecules are identified as produced by the Wolbachia endosymbiont, providing evidence for direct nucleic acid-based interdomain communication between filarial nematodes and their bacterial obligate endosymbiont.

2022-01-15 | GSE143730 | GEO

Wolbachia infection modifies the profile, shuttling and structure of microRNAs in a mosquito cell line

Project description:We characterized the miRNA composition of the nucleus and the cytoplasm of uninfected cells and compared it with the one of cells infected with the endosymbiotic bacterium Wolbachia strain wMelPop-CLA. We found an overall increase of small RNAs between 18 and 28 nucleotides in both cellular compartments in Wolbachia-infected cells and identified specific miRNAs induced and/or suppressed by the Wolbachia infection. We discuss the mechanisms that the cell may use to shuttle miRNAs between the cytoplasm and the nucleus. In addition, we identified piRNAs that changed their abundance in response to Wolbachia infection. The miRNAs and piRNAs identified in this study provide promising leads for investigations into the host-endosymbiont interactions and for better understanding of how Wolbachia manipulates the host miRNA machinery in order to facilitate its persistent replication in infected cells.

2014-02-22 | GSE55210 | GEO

Wolbachia endosymbiont of Tyrophagus putrescentiae

Project description:Wolbachia endosymbiont of Tyrophagus putrescentiae, transcriptome assembly

| PRJNA606073 | ENA

Wolbachia endosymbiont of Heterodera schachtii strain:wHet

Project description:Wolbachia endosymbiont of Heterodera schachtii strain:wHet Assembly

| PRJNA1148219 | ENA

Wolbachia endosymbiont of Onchocerca lupi isolate:Wolbachia Endosymbiont of Onchocerca lupi

Project description:Wolbachia endosymbiont of Onchocerca lupi isolate:Wolbachia Endosymbiont of Onchocerca lupi Genome sequencing

| PRJNA933935 | ENA

Wolbachia endosymbiont from Bemisia tabaci

Project description:Wolbachia endosymbiont of Bemisia tabaci strain wBt-MED genome shotgun assembly