Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Fusarium pseudograminearum strain:Fp-delta-fdb1#1

ABSTRACT: Fusarium pseudograminearum strain:Fp-delta-fdb1#1 Raw sequence reads

PROVIDER: PRJNA286814 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR2060960.fastq.gz	Fastqsanger.gz
	SRR2060957.fastq.gz	Fastqsanger.gz
	SRR2060958.fastq.gz	Fastqsanger.gz
	SRR2060959.fastq.gz	Fastqsanger.gz

Items per page:

1 - 4 of 4

Similar Datasets

Transcription profiling of wheat response to infection by Fusarium pseudograminearum

Project description:Crown rot of wheat, caused by Fusarium pseudograminearum and other Fusarium species is an important disease globally. To understand the host response to challenge by Fp, we examined gene exression changes in the stem base of the wheat variety Kennedy, following inoculation with macroconidia using the Affymetrix GeneChip Wheat Genome Array. Induced genes included mainly those with defensive functions such as genes encoding anti-microbial proteins as well as oxidative stress-related proteins, signalling molecules, and proteins involved in both primary and secondary metabolism. This study is the first comprehensive analysis of the wheat transcriptome during crown rot infection and provides new insights into the host processes involved in plant defence against this pathogen. Experiment Overall Design: There are six samples, three F. pseudograminearum inoculated samples and three mock inoculated samples. Each sample consists of 2cm of stem base from approximately 20 plants.

2009-01-14 | E-GEOD-13660 | biostudies-arrayexpress

Fusarium pseudograminearum

Project description:Fusarium pseudograminearum Raw sequence reads

| PRJNA540383 | ENA

Fusarium pseudograminearum

Project description:Fusarium pseudograminearum Raw sequence reads

| PRJNA540385 | ENA

Fusarium pseudograminearum

Project description:Fusarium pseudograminearum Raw sequence reads

| PRJNA306180 | ENA

Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum

2009-01-01 | GSE13660 | GEO