Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Eimeria

ABSTRACT: rDNA-seq of Eimeria community: Petrogale penicillata

PROVIDER: PRJNA291440 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR2147750_1.fastq.gz	Fastqsanger.gz
	SRR2147750_2.fastq.gz	Fastqsanger.gz
	SRR2147760_1.fastq.gz	Fastqsanger.gz
	SRR2147760_2.fastq.gz	Fastqsanger.gz
	SRR2147770_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 150

Similar Datasets

Pig Eimeria

Project description:Eimeria 18S rDNA sequences from pigs.

| PRJEB23344 | ENA

Corncrake Eimeria

Project description:18S rDNA sequences from Eimeria which infect corncrake

| PRJEB24176 | ENA

Cryptic Eimeria species

Project description:Partial 18S rDNA and COI sequences from cryptic Eimeria species.

| PRJEB23613 | ENA

Petrogale penicillata isolate:S766

Project description:Petrogale penicillata isolate:S766 Genome sequencing

| PRJNA743688 | ENA

Dual RNA-seq transcriptome analysis of chicken caeca infected with Eimeria tenella

Project description:In order to elucidate the infection mechanisms of Eimeria tenella and the chicken immune response, chickens were infected with Eimeria tenella strain Hougton sporozoites. Samples were taken at 0, 1, 2, 3, 4 and 10 days post-infection and mRNA sequenced. A dual-RNA seq analysis was carried out, comparing the expression of infected chickens during each sampling time point with uninfected chickens and comparing E. tenella samples during the infection with a sample of pure sporozoites. The results show a variety of response signals in the chicken, both previously known and unknown, as well as a clear role for a variety of infection-related genes in E. tenella

2021-09-22 | GSE160169 | GEO

Liver-expressed antimicrobial peptide-2 is downregulated in Eimeria maxima-infected chickens

Project description:Avian coccidiosis is a major disease of poultry caused by the intestinal protozoa Eimeria. Aviagen line A and line B birds show differential susceptibility to Eimeria infection, with line B birds exhibiting higher lesion scores and mortality. The objective of this study was to examine differential intestinal gene expression between line A and B chicks in response to a challenge with Eimeria maxima. Following challenge with 1 x 10^4 oocysts/chick, greater than 40% of line A chicks had lesion scores of 0 to 1 (on 0 to 4 scale), similar to controls. In contrast, all line B challenged chicks at this same dose had lesion scores of 2 to 4.

2011-07-01 | GSE25588 | GEO

Petrogale

Project description:Genomic sequencing of the Petrogale penicillata species complex

| PRJNA741375 | ENA

Functional characterization of a surface antigen suppressing ApiAP2 in Eimeria tenella

Project description:Apicomplexa parasite Eimeria is the causative agent of coccidiosis, which leads to enteritis in animals and causes huge economic burden to the farm industry. The Apicomplexan Apetala2/ERF (ApiAP2) transcription factors have proved to play key roles in various processes in other Apicomplexa parasites. However, little is known about the function of ApiAP2s in Eimeria species. In this study, we functionally characterized an ApiAP2 by direct knockout mediated by CRISPR-Cas9. Our results showed that the invasion efficiency, total oocyst output and virulence to the host were significantly impaired after EtAP2-S1 depletion. RNA-Seq and CUT&Tag analyze showed that EtAP2-S1 targets on the promoters of numerous genes and its knockout results in upregulation of 59 sag genes. Additionally, the knockout strain exhibits significantly reduced virulence but provides excellent immune protection, which makes it a good vaccine candidate. This study demonstrates that EtAP2-S1 is a fitness coffering gene that suppress the expression of sag genes in E. tenella, and this is the first practice in developing gene knockout vaccine for the control of coccidiosis.

2024-12-01 | GSE282226 | GEO

Eimeria tenella

Project description:Eimeria tenella Genome sequencing

| PRJNA850893 | ENA

Eimeria tenella

Project description:Eimeria tenella Raw sequence reads

| PRJNA921718 | ENA