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Nicotiana benthamiana

ABSTRACT: Potato virus Y HCPro suppression of antiviral silencing in Nicotiana benthamiana plants correlates with its ability to bind in vivo to small RNAs of 21 and 22 nucleotides in length of viral sequence

PROVIDER: PRJNA292454 | ENA |

REPOSITORIES: ENA

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Dataset's files

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			Action	DRS
	SRR2154062.fastq.gz	Fastqsanger.gz
	SRR2154063.fastq.gz	Fastqsanger.gz
	SRR5342592.fastq.gz	Fastqsanger.gz
	SRR5342593.fastq.gz	Fastqsanger.gz
	SRR5342594.fastq.gz	Fastqsanger.gz

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Project description:In order to find the miRNAs, target genes and signaling pathways related to the dwarf phenotype induced by NlCSP1, 35S-NlCSP1 and 35S-GFP control were infiltrated into Nicotiana benthamiana. We analyzed the differentially expressed miRNAs in the infiltrated leaves (NlCSP1_Z/GFP_Z) and the upper uninfiltrated leaves (NlCSP1_O/GFP_O) of N. benthamiana. A total of 106 and 97 differentially expressed miRNAs were identified in NlCSP1_Z/GFP_Z and NlCSP1_O/GFP_O, respectively. KEGG annotation revealed a large number of differentially expressed miRNAs involved in plant hormone signal transduction, indicating that NlCSP1 changed the hormone signal pathway in N. benthamiana.

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