Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Plant metagenome

ABSTRACT: Rhizospheric and endophytic bacteria from Poplar: Test of primer pairs

PROVIDER: PRJNA292754 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR2157582.fastq.gz	Fastqsanger.gz
	SRR2157583.fastq.gz	Fastqsanger.gz
	SRR2157548.fastq.gz	Fastqsanger.gz

Items per page:

1 - 3 of 3

Similar Datasets

rhizosphere metagenome

Project description:Rhizospheric and endophytic bacteria Raw sequence reads

| PRJNA292161 | ENA

tea plant

Project description:tea Tea endophytic bacteria

| PRJEB51321 | ENA

plant metagenome

Project description:Rhizosphere Soil Bacteria and Endophytic Bacterial Community in Phyllostachys pubescens Raw sequence reads

| PRJNA836717 | ENA

plant

Project description:microbial community of endophytic bacteria in mustard tuber

| PRJNA1070039 | ENA

Reprogramming of bacterial and plant sulfur metabolisms in Enterobacter sp. SA187-induced plant salt stress tolerance

Project description:Although some mechanisms are known how plant growth beneficial bacteria help plants to grow under stressful conditions, we still know little how the metabolism of host plants and bacteria is coordinated during the establishment of functional interaction. In the present work, using single and dual transcriptomics, we studied the reprograming of metabolic and signaling pathways of Enterobacter sp. SA187 with Arabidopsis thaliana during the change from free-living to endophytic host-microbe interaction. We could identify major changes in primary and secondary metabolic pathways in both the host and bacteria upon interaction, with an important role of the sulfur metabolism and retrograde signaling in mediating plant resistance to salt stress. Also, we studied the effect of SA187 endogenous compounds and its role on sulfur metabolism and consequently salt tolerance. These data should help future research in the field of beneficial plant-microbe interactions for developing sophisticated strategies to improve agriculture of crops under adverse environmental conditions. transcriptome of Arabidopsis thaliana organs with beneficial microbe, beneficial microbe endogenous compound, and ethylene precursor

2021-02-25 | GSE145884 | GEO

Project description:CHSH metaBARFcoding primer test

| PRJNA774371 | ENA

plant metagenome strain:Grapevine Red Globe and Bangalore Blue

Project description:Seed/embryo transmission of endophytic bacteria

| PRJNA701136 | ENA

plant metagenome

Project description:Sequencing and analyzing of hypervariable region 6 of 16S rRNA gene of endophytic bacteria from Noni

| PRJNA270342 | ENA

Plant metagenome

Project description:Inoculation of endophytic fungal communities

| PRJNA518913 | ENA