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Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446

ABSTRACT: Thermophilic, acidophilic bacterium

PROVIDER: PRJNA29405 | ENA |

REPOSITORIES: ENA

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			Action	DRS
		Other
	SRR013440.fastq.gz	Fastqsanger.gz
	SRR013441.fastq.gz	Fastqsanger.gz
	SRR3924077_1.fastq.gz	Fastqsanger.gz
	SRR3924077_2.fastq.gz	Fastqsanger.gz

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Structure of endoglucanase Cel9A from the thermoacidophilic Alicyclobacillus acidocaldarius.

Project description:The production of biofuels using biomass is an alternative route to support the growing global demand for energy and to also reduce the environmental problems caused by the burning of fossil fuels. Cellulases are likely to play an important role in the degradation of biomass and the production of sugars for subsequent fermentation to fuel. Here, the crystal structure of an endoglucanase, Cel9A, from Alicyclobacillus acidocaldarius (Aa_Cel9A) is reported which displays a modular architecture composed of an N-terminal Ig-like domain connected to the catalytic domain. This paper describes the overall structure and the detailed contacts between the two modules. Analysis suggests that the interaction involving the residues Gln13 (from the Ig-like module) and Phe439 (from the catalytic module) is important in maintaining the correct conformation of the catalytic module required for protein activity. Moreover, the Aa_Cel9A structure shows three metal-binding sites that are associated with the thermostability and/or substrate affinity of the enzyme.

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Complete genome sequence of Alicyclobacillus acidocaldarius type strain (104-IA).

Project description:Alicyclobacillus acidocaldarius (Darland and Brock 1971) is the type species of the larger of the two genera in the bacillal family 'Alicyclobacillaceae'. A. acidocaldarius is a free-living and non-pathogenic organism, but may also be associated with food and fruit spoilage. Due to its acidophilic nature, several enzymes from this species have since long been subjected to detailed molecular and biochemical studies. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is the first completed genome sequence of the family 'Alicyclobacillaceae'. The 3,205,686 bp long genome (chromosome and three plasmids) with its 3,153 protein-coding and 82 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

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Complete genome sequence of Alicyclobacillus acidocaldarius strain Tc-4-1.

Project description:Alicyclobacillus acidocaldarius strain Tc-4-1 was initially isolated from a hot spring in Tengchong, China. This organism is both thermophilic and acidophilic. It can produce heat- and acid-stable enzymes, such as amylase and esterase, which may be important in industry. Here we report the whole genome sequence of the strain.

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Project description:Gene expression during metabolism of polysaccharides and sugars by Alicyclobacillus acidocaldarius

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