Project description:Helicobacter cinaedi is an emerging bacterial pathogen of immunosuppressed individuals. The species is traditionally thought to require an H2-enhanced microaerobic atmosphere for growth, although it can proliferate under aerobic conditions when co-cultured with epithelial monolayers or supplemented with certain metabolites (notably, L-lactate). The goal of this experiment was to assess the global transcription changes that occur in the H. cinaedi type strain (ATCC BAA-847) under various media and atmospheric conditions. These include bacterial monoculture, as well as co-culture with Caco-2 intestinal epithelial cells. In total, Illumina mRNA-seq (stranded, paired-end) was performed on H. cinaedi grown under 9 in vitro culture conditions (4-5 biologic replicates per condition).

2016-09-19 | E-MTAB-5062 | biostudies-arrayexpress

Colwellia piezophila ATCC BAA-637

Project description:Colwellia piezophila ATCC BAA-637

| PRJNA182419 | ENA

Oceanimonas smirnovii ATCC BAA-899

Project description:Oceanimonas smirnovii ATCC BAA-899

| PRJNA185294 | ENA

Caldimonas manganoxidans ATCC BAA-369

Project description:Caldimonas manganoxidans ATCC BAA-369

| PRJNA182454 | ENA

Enterobacter kobei ATCC BAA-260 isolate:ATCC BAA-260

Project description:Enterobacter kobei ATCC BAA-260 genome sequencing