Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Arabidopsis lyrata gene annotation using RNA-sequencing data

ABSTRACT: Arabidopsis lyrata gene annotation using RNA-sequencing data

PROVIDER: PRJNA321818 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR2033950.fastq.gz	Fastqsanger.gz
	SRR2033951.fastq.gz	Fastqsanger.gz
	SRR2033952.fastq.gz	Fastqsanger.gz
	SRR2033953.fastq.gz	Fastqsanger.gz
	SRR2039793.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 19

Similar Datasets

Arabidopsis lyrata small RNAs

Project description:Small RNA sequences from Arabidopsis lyrata leaves, as isolated from a single sample of rosette leaf tissue. These data were analyzed to 1) examine microRNA processing accuracy in A. lyrata and 2) to examine patterns of 24nt siRNA accumulation in A. lyrata.

2010-03-01 | GSE18077 | GEO

Arabidopsis lyrata flowering tissues small RNAs

Project description:Small RNA sequences from Arabidopsis lyrata flowering tissues, as isolated from flowering tissues of two biological replicates. These data were analyzed to 1) discover new micoRNAs in A. lyrata 2) examine microRNA processing accuary in A. lyrata and 3) to examine patterns of 24nt siRNA accumulation in A. lyrata.

2010-04-22 | GSE20442 | GEO

Arabidopsis lyrata subsp. lyrata

Project description:Arabidopsis lyrata subsp. lyrata Genome sequencing

| PRJNA273798 | ENA

Arabidopsis lyrata subsp. lyrata

Project description:Arabidopsis lyrata subsp. lyrata Raw sequence reads

| PRJNA339675 | ENA

Comparative transcriptome profiling of Arabidopsis lyrata and Arabidopsis thaliana

Project description:Arabidopsis thaliana and Arabidopsis lyrata are two closely related Brassicaceae species, which are used as models for plant comparative biology. They differ by lifestyle, predominant mating strategy, ecological niches and genome organization. In order to explore molecular basis of specific traits, we performed RNA-sequencing of vegetative rosettes from both species. Additionally, we sequenced apical meristems and inflorescences of A. lyrata that allow for intra-specific transcriptome comparison in several major developmental stages. Please view also related dataset GSE69077 (RNA-sequencing of heat stressed A. lyrata and A. thaliana plants).

2015-08-01 | GSE69222 | GEO

Arabidopsis lyrata subsp. lyrata

Project description:Arabidopsis lyrata subsp. lyrata Transcriptome or Gene expression

| PRJNA319148 | ENA

Arabidopsis thaliana and Arabidopsis lyrata degradomes

Project description:Deep sequencing of the 5' ends of uncapped, polyA-enriched mRNA from two biological replicate samples from Arabidopsis thaliana inflorescences, as well as two biological replicates of Arabidopsis lyrata inflorescences. These data were used to experimentally identify sliced microRNA targets from the two species.

2010-04-22 | GSE20451 | GEO

Arabidopsis lyrata small RNAs

2010-03-01 | E-GEOD-18077 | biostudies-arrayexpress

Arabidopsis lyrata

Project description:Arabidopsis lyrata Genome sequencing

| PRJNA323156 | ENA

Arabidopsis lyrata

Project description:Arabidopsis lyrata small RNAs

| PRJNA119349 | ENA