Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Lunasporangiospora selenospora KOD 1015

ABSTRACT: Lunasporangiospora selenospora KOD 1015 Resequencing

PROVIDER: PRJNA340476 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR5192055_1.fastq.gz	Fastqsanger.gz
	SRR5192055_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 3 of 3

Similar Datasets

Lunasporangiospora selenospora strain:KOD 1015

Project description:Lunasporangiospora selenospora KOD 1015 Transcriptome - KOD 1015

| PRJNA677636 | ENA

Lunasporangiospora selenospora strain:KOD 1015

Project description:Lunasporangiospora selenospora KOD 1015 Standard Draft genome sequencing

| PRJNA677637 | ENA

Lunasporangiospora selenospora

Project description:Mortierella selenospora overview

| PRJNA411863 | ENA

Lunasporangiospora selenospora strain:CBS 811.68

Project description:Mortierella selenospora CBS 811.68 Transcriptome - CBS_811.68

| PRJNA408427 | ENA

Thamnostylum lucknowense strain:RSA 1015+ | isolate:RSA 1015+

Project description:Thamnostylum lucknowense RSA 1015+Resequencing

| PRJNA535817 | ENA

Linnemannia amoeboidea strain:KOD 1005 | isolate:KOD 1005

Project description:Linnemannia amoeboidea KOD 1005 Transcriptome - KOD1005

| PRJNA713095 | ENA

Pseudoroseomonas cervicalis strain:SORGH_AS 1015

Project description:Roseomonas cervicalis SORGH_AS 1015 genome sequencing

| PRJNA957379 | ENA

Expression data from batch cultivations with the acidogenic Aspergillus niger wild type strain ATCC 1015 and the areB complete deletion strain constructed using ATCC 1015 as background strain with glucose or glycerol as carbon sources.

2011-01-31 | GSE21015 | GEO

Project description:This approach aims at searching unidentified regulatory roles of the AreB transcription factor in the overall carbon metabolism of A. niger. A full areB gene deletion mutant was constructed and characterized in A. niger ATCC 1015. Both strains were grown on glucose or glycerol using ammonia as nitrogen source in batch cultivations and the transcriptome was analyzed using three biological replicated transcriptome experiments. Two areB gene deletion replicates, one on glucose and one on glycerol were discarded due to bad quality and therefore not included in the analysis. Samples for RNA extraction were collected and further processed for hybridization in custom designed Affymetrix microarrays containing probes for three Aspergillus species including A. niger. Triplicate batch fermentations with the two Aspergillus niger strains used, the wild type A. niger strain ATCC 1015 and the areB complete gene deletion strain were carried out and transcriptome analysis was performed. Biomass from each batch cultivation was harvested in the exponential phase of growth and further processed for RNA extraction and hybridization on Affymetrix microarrays.

2011-01-31 | E-GEOD-21015 | biostudies-arrayexpress

RNA-seq of a P. infestans resistance segregating population with parents Desiree (cv) and breeding line SW93-1015

Project description:A segregating population was produced by crossing the tetraploid parents, the cultivar Desire and the breeding line SW93-1015. In all, 34 progeny lines were further characterized by phenotyping for multiple traits both in the field and controlled climate settings. For example the late blight resistance screening was done for the lines. Leaf transcriptomes of each line and the two parents were sequenced by Illumina HiSeq 2000 to produce RNA-seq data.

2019-04-02 | E-MTAB-5996 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data