Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Pseudomonas mediterranea

ABSTRACT: Pseudomonas mediterranea overview

PROVIDER: PRJNA342866 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR4235057_subreads.fastq.gz	Fastqsanger.gz
	SRR4235058_subreads.fastq.gz	Fastqsanger.gz

Items per page:

1 - 3 of 3

Similar Datasets

Pseudomonas mediterranea strain:S58

Project description:Pseudomonas mediterranea strain:S58 Genome sequencing

| PRJNA528556 | ENA

Pseudomonas mediterranea CFBP 5447

Project description:Pseudomonas mediterranea CFBP 5447 Genome sequencing and assembly

| PRJNA210952 | ENA

Transcriptome analysis of lemon leaves (Citrus limon) infected by Plenodomus tracheiphilus reveals the effectiveness of Pseudomonas mediterranea in priming the plant response to mal secco disease

Project description:The use of Biological Control Agents (BCAs) to cope diseases has received considerable attention owing to its high efficiency and environmental safety. The aim of our study was to investigate the potential role of the Pseudomonas mediterranea pre-treatments in the response of lemon [Citrus limon (L.) Burm. f.] against mal secco, this being a devastating citrus disease caused by the fungus Plenodomus tracheiphilus. RNAseq analysis revealed that the fungus induced a marked reprogramming of the transcriptome, but P. Mediterranea pre-treatments strongly reduced lemon leaf transcriptome modifications and limited the amount of the fungus DNA inside the plant tissue. Furthermore, P. mediterranea prevented the down regulation of the genes involved in the effector triggered immunity (ETI) and the deregulation of genes involved in the main phytohormone’s biosynthesis and perception. As far as we know, this work represents the first report on the analysis of P. tracheiphilus-lemon plant-BCA interaction at molecular level.

2023-09-30 | GSE227934 | GEO

Falsiruegeria mediterranea

Project description:Phaeomarinomonas mediterranea overview

| PRJNA186478 | ENA

Biscogniauxia mediterranea

Project description:Biscogniauxia mediterranea overview

| PRJNA568378 | ENA

Martelella mediterranea

Project description:Martelella mediterranea overview

| PRJNA169953 | ENA

Brevundimonas mediterranea

Project description:Brevundimonas mediterranea overview

| PRJNA611664 | ENA

Pseudomonas mediterranea strain:DSM 16733 | isolate:DSM 16733

Project description:Pseudomonas mediterranea DSM 16733 genome sequencing

| PRJNA323037 | ENA

The head-regeneration transcriptome of the planarian Schmidtea mediterranea

Project description:The head-regeneration transcriptome of the planarian Schmidtea mediterranea

2011-07-15 | E-MTAB-607 | biostudies-arrayexpress

Expression analysis of purified intestinal phagocytes in Schmidtea mediterranea

Project description:Identification of differentially expressed genes in intestinal phagocytes, compared to non-intestinal cells in Schmidtea mediterranea.

2012-10-01 | GSE35565 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data