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Salmonella enterica subsp. enterica strain:Typhimurium 14028s

ABSTRACT: Salmonella Typhimurium 14028s ROS Transcriptome

PROVIDER: PRJNA357075 | ENA |

REPOSITORIES: ENA

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Dataset's files

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			Action	DRS
	SRR5192881_1.fastq.gz	Fastqsanger.gz
	SRR5192881_2.fastq.gz	Fastqsanger.gz
	SRR5192882_1.fastq.gz	Fastqsanger.gz
	SRR5192882_2.fastq.gz	Fastqsanger.gz
	SRR9188680.fastq.gz	Fastqsanger.gz

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Project description:Summary: Salmonella enterica serovar Typhimurium strain 14028s transcriptome response to lettuce medium (LM) and lettuce root exudates (LX) to minimal medium (MM). Purpose: Salmonella mRNA profile, when grown in different media was compared to minimal medium to reveal environment specific transcriptional changes. Methods: mRNA profiles were generated using Illumina HiSeq in triplicates. The sequences were analysed using Bowtie2 followed by Cufflinks.

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