Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Bovine metagenome

ABSTRACT: Respiratory microbiome in feedlot cattle Raw sequence reads

PROVIDER: PRJNA361415 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR5191080_1.fastq.gz	Fastqsanger.gz
	SRR5191080_2.fastq.gz	Fastqsanger.gz
	SRR5191081_1.fastq.gz	Fastqsanger.gz
	SRR5191081_2.fastq.gz	Fastqsanger.gz
	SRR5191082_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

The nasopharyngeal microbiota of cattle with bovine respiratory disease

Project description:The nasopharyngeal microbiota of healthy cattle vs. cattle diagnosed with BRD in a commercial feedlot setting was compared using a high-density 16S rRNA microarray (Phylochip). Nasopharyngeal samples were taken from both groups of animals (n=5) at feedlot entry (day 0) and >60 days later.

2015-06-21 | E-MTAB-3430 | biostudies-arrayexpress

bovine metagenome

Project description:Bronchoalveolar lavage metagenomes from bovine respiratory disease fatalities in feedlot cattle

| PRJNA395911 | ENA

bovine metagenome

Project description:Characterization of the nasopharyngeal microbiota in naturally occurring respiratory disease in feedlot cattle

| PRJNA318938 | ENA

bovine gut metagenome

Project description:Dairy cattle archaea raw sequence reads

| PRJNA285059 | ENA

bovine gut metagenome

Project description:Fecal Samples from feedlot cattle with hemorrhagic distal colitis

| PRJNA326197 | ENA

Applying multi-omics data to study the genetic background of bovine respiratory disease infection in feedlot crossbred cattle

Project description:Bovine respiratory disease (BRD) is the most common and costly infectious disease affecting the well-being and productivity of beef cattle in North America. BRD is a complex disease whose development is dependent on environmental factors and host genetics. Due to the polymicrobial nature of BRD, our understanding of the genetic and molecular mechanisms underlying the disease is still limited. This knowledge would augment the development of better genetic/genomic selection strategies and more accurate diagnostic tools to reduce BRD prevalence. Therefore, this study utilized multi-omics data (genomics, transcriptomics, and metabolomics) analyses to study the associations between genome, transcriptome, metabolome, and BRD phenotype of feedlot crossbred cattle. The findings may be useful for the development of genomic selection strategies for BRD susceptibility, and for the development of new diagnostic and therapeutic tools.

2023-01-11 | GSE217317 | GEO

bovine metagenome

Project description:Effects of Ceftiofur and Chlortetracycline on the Resistome of Feedlot Cattle

| PRJNA419351 | ENA

bovine metagenome

Project description:respiratory tract and joint microbiota of cattle

| PRJNA788973 | ENA

bovine gut metagenome

Project description:2013 Summer Nebraska Cattle Fecal 16S Raw sequence reads

| PRJNA309245 | ENA