Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Marine sediment metagenome

ABSTRACT: The diversity and biogeography of abundant and rare intertidal marine micro-eukaryotes

PROVIDER: PRJNA362750 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR5252700_1.fastq.gz	Fastqsanger.gz
	SRR5252700_2.fastq.gz	Fastqsanger.gz
	SRR5252720_1.fastq.gz	Fastqsanger.gz
	SRR5252720_2.fastq.gz	Fastqsanger.gz
	SRR5252740_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 73

Similar Datasets

Comparative transcriptomics between two potentially toxin-secreting marine annelids: Glycera alba and Hediste diversicolor

Project description:Transcriptome profiling of whole proboscis and body wall of the marine Polychaeta Glycera alba, adults, wild population (sex undiscriminated), collected from the muddy-sandy intertidal flats at W Portugal (2020). Transcriptome profiling of glandular and muscular regions of proboscis of the marine Polychaeta Hediste diversicolor, adults, wild population (sex undiscriminated), collected from the muddy-sandy intertidal flats at W Portugal (2019).

2023-11-29 | GSE196852 | GEO

A phylogenetic approach to the recruitment of venom proteins in a marine Polychaeta

Project description:Transcriptome profiling of whole proboscis and body wall of the marine Polychaeta Eulalia sp. (Eulalia viridis), adults, wild population (sex undiscriminated), collected from the rocky intertidal at W Portugal (2018).

2021-01-27 | GSE143954 | GEO

Survey functional genes in Arctic marine sediment communities

Project description:The objective was to identify functional genes encoded by Fungi and fungal-like organisms to assess putative ecological roles Using the GeoChip microarray, we detected fungal genes involved in the complete assimilation of nitrate and the degradation of lignin, as well as evidence for Partitiviridae (a mycovirus) that likely regulates fungal populations in the marine environment. These results demonstrate the potential for fungi to degrade terrigenously-sourced molecules, such as permafrost and compete with algae for nitrate during blooms. Ultimately, these data suggest that marine fungi could be as important in oceanic ecosystems as they are in freshwater environments.

2020-07-14 | GSE117831 | GEO

marine sediment metagenome

Project description:Microbial eukaryotes

| PRJNA244592 | ENA

marine sediment metagenome

Project description:Intertidal sediment Metagenome

| PRJNA253279 | ENA

marine sediment metagenome

Project description:Intertidal sediment Targeted Locus

| PRJNA183424 | ENA

Marine sediment

Project description:Deep biosphere: assessment of marine sediment microbial diversity

| PRJNA527622 | ENA

Environmental heat stress in Greenland blue mussels (Mytilus edulis)

Project description:Background biology: Global warming has accelerated in recent decades, with the Arctic warming 2–3 times faster than the global average. As a result boreal species are expanding into the Arctic, at a pace reflecting environmental warming. Nevertheless, the poleward expansion of boreal marine species is restricted by their ability to tolerate low water temperatures, and in the case of intertidal species, sub-zero air temperatures during winter. In Greenland, however, the number of days with extreme sub-zero air temperatures has decreased by more than 50% since the 1950’s, suggesting that the low air temperature constraint is weakening. Although boreal intertidal species could potentially benefit from this warmer climate to establish populations in the Arctic, recent work has shown that local intertidal summer air temperatures in Greenland can exceed 36°C. This temperature is above the thermoregulatory capacity of many boreal intertidal species, including the highly abundant blue mussel Mytilus edulis. Therefore will further colonisation of M. edulis in Greenland be inhibited by the increasingly warm summer temperatures. Aim of experiment: Intertidal animals (Greenland blue mussel M. edulis) were sampled in situ on the first warm days of the year from the inner (warmer) and outer (cooler) regions of the Godthåbsfjorden around Nuuk (64°N) to examine the fjord temperature gradient effect. In addition, subtidal M. edulis were also collected and subjected to two acute temperature shocks of 22 and 32°C, which represented common and extreme summer air temperatures for intertidal habitats near Nuuk.

2020-11-25 | E-MTAB-9786 | biostudies-arrayexpress

marine metagenome

Project description:Marine eukaryotes Targeted loci environmental

| PRJNA283296 | ENA

Marine sediment metagenome

Project description:Microbial diversity in tropical shallow marine sediments

| PRJNA522377 | ENA