Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Genomic diversity between Pseudomonas aeruginosa isolated from dental unit waterlines

PROVIDER: PRJNA378495 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	MWXG01.dat.gz	Other
	MWXG01.fasta.gz	Fasta.gz
	MWXG01.master.dat	Other
	MWXH01.dat.gz	Other
	MWXH01.fasta.gz	Fasta.gz

Items per page:

1 - 5 of 156

Similar Datasets

Project description:Bacterial diversity in dental unit waterlines Raw sequence reads

| PRJNA690183 | ENA

Bacterial composition of DUWL

Project description:Bacterial composition Inside Dental Unit Waterlines

| PRJEB7584 | ENA

Project description:Microbial diversity in dental unit waterlines and generated dental bioaerosols affected by waterline disinfection

| PRJNA1135454 | ENA

Project description:Pyrosequencing Analysis of Bacterial Community Changes in Dental Unit Waterlines

| PRJNA958473 | ENA

Density and diversity of bacterial and fungal communities in dental unit waterlines (DUWL) subjected to disinfectants

Project description:Density and diversity of bacterial and fungal communities in dental unit waterlines (DUWL) subjected to disinfectants

| PRJEB11059 | ENA

Genomic DNA hybridization of Pseudomonas aeruginosa strains PAO1 and PA14

Project description:Genomic DNA from Pseudomonas aeruginosa strains PAO1 and PA14

2015-11-15 | GSE67038 | GEO

Occurrence and diversity of both bacterial and fungal communities in dental unit waterlines (DUWL) subjected to disinfectants

Project description:Occurrence and diversity of both bacterial and fungal communities in dental unit waterlines (DUWL) subjected to disinfectants

| PRJEB12425 | ENA

Pseudomonas aeruginosa cystic fibrosis strains share a core proteome

Project description:The opportunistic pathogen Pseudomonas aeruginosa is among the main colonizers of the lungs of cystic fibrosis (CF) patients. We have isolated and sequenced several P. aeruginosa isolates from the sputum of CF patients and used phenotypic, genomic and proteomic analyses to compare these CF derived strains with each other and with the model strain PAO1.

2015-10-14 | PXD002865 | Pride

DNA Methyltransferase M.PaeTBCFI in a chronically adapted Pseudomonas aeruginosa strain

Project description:Pseudomonas aeruginosa is an opportunistic pathogen which causes acute and chronic infections that are difficult to treat. Comparative genomic analysis has showed a great genome diversity among P. aeruginosa clinical strains and revealed important regulatory traits during chronic adaptation. While current investigation of epigenetics of P. aeruginosa is still lacking, understanding the epigenetic regulation may provide biomarkers for diagnosis and reveal important regulatory mechanisms. The present study focused on characterization of DNA methyltransferases (MTases) in a chronically adapted P. aeruginosa clinical strain TBCF10839. Single-molecule real-time sequencing (SMRT-seq) was used to characterize the methylome of TBCF. RCCANNNNNNNTGAR and TRGANNNNNNTGC were identified as target motifs of DNA MTases, M.PaeTBCFI and M.PaeTBCFII, respectively.

2023-07-22 | GSE209530 | GEO

Determination of ErfA regulon by DAP-seq in several Pseudomonas species

Project description:ErfA is a transcription factor of Pseudomonas aeruginosa. We here define the genome-wide binding sites of ErfA by DAP-seq in Pseudomonas aeruginosa PAO1 and IHMA87, Pseudomonas chlororaphis PA23, Pseudomonas protegens CHA0 and Pseudomonas putida KT2440.

2019-12-20 | GSE137648 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data