Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Analysis of transcriptome changes arising from MIR205HG modulation in prostate cells

ABSTRACT: Analysis of transcriptome changes arising from MIR205HG modulation in prostate cells

PROVIDER: PRJNA407929 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Genome-wide chromatin occupancy of MIR205HG/LEADR in prostate basal epithelial cells

Project description:Aside serving as host gene for the microRNA miR-205, MIR205HG transcribes for a nuclear chromatin-associated long noncoding RNA (lncRNA) able to restrain the differentiation of prostate basal cells, a finding that led to its reannotation as LEADR (Long Epithelial Alu-interacting Differentiation-related RNA). In our previous work (PMID: 30659180), we showed that genes that are modulated upon manipulation of MIR205HG/LEADR are characterized by the presence of an Alu sequence in their promoters. Notably, an Alu element also spans the first and second exon of MIR205HG/LEADR, thus suggesting its possible involvement in target selection and binding. Here, we performed Chromatin Isolation by RNA precipitation followed by DNA-sequencing (ChIRP-seq) to map MIR205HG/LEADR chromatin occupancy at a genome-wide level in prostate basal cells.

2022-06-07 | GSE201567 | GEO

Analysis of transcriptome changes arising from MIR205HG modulation in prostate cells

Project description:This SuperSeries is composed of the SubSeries listed below.

2019-01-23 | GSE104003 | GEO

Changes in Prostate Gene Expression in a Cohort Undergoing an Intensive Nutrition and Lifestyle Intervention

Project description:The GEMINAL Study- Gene Expression Modulation by Intervention with Nutrition and Lifestyle We conducted a pilot study to examine changes in gene expression in men diagnosed with low risk prostate cancer who participated in an intensive nutrition and lifestyle intervention. We profiled gene expression in morphologically normal tissues from prostate biopsies of all 30 participants before and after the intervention. Keywords: Differential gene expression analysis Pre-intervention versus Post-Intervention

2010-05-26 | E-GEOD-10306 | biostudies-arrayexpress

Changes in Prostate Gene Expression in a Cohort Undergoing an Intensive Nutrition and Lifestyle Intervention

2008-03-01 | GSE10306 | GEO

Modulation of ST6Gal1 in Prostate Cancer Cells

Project description:Proteomics analyses using LC-MS/MS was performed on wild-type and ST6Gal1 overexpressing DU145 prostate cancer cells. Total cell lysate and secreted proteins from both were analyzed.

2023-11-06 | PXD041316 | Pride

Transcriptomic changes following NR1D1 modulation in thyroid cancer cell lines

Project description:Transcriptomic changes following NR1D1 modulation in thyroid cancer cell lines

| PRJNA1073203 | ENA

Genome-wide chromatin occupancy of MIR205HG/LEADR in prostate basal epithelial cells

Project description:Genome-wide chromatin occupancy of MIR205HG/LEADR in prostate basal epithelial cells

| PRJNA832237 | ENA

Biospecimen Collection in Identifying Genetic Changes in Patients With Breast, Prostate, Colorectal, Liver, or Kidney Cancer or Multiple Myeloma Undergoing Surgery

Project description:This research trial studies how well biospecimen collection works in identifying genetic changes in patients with breast, prostate, colorectal, liver, or kidney cancer or multiple myeloma undergoing surgery. Studying samples collected during surgery may add to the understanding of cancer by looking for the genetic changes that cause early cancer onset in people of certain racial and ethnic groups.

| 2382834 | ecrin-mdr-crc

PRMT5 knockdown changes gene expression in prostate cancer cells

Project description:PRMT5 knockdown changes gene expression in prostate cancer cells

| PRJNA482621 | ENA

Project description:Age-Related Gene Expression Changes in Prostate Cancer Patients

| PRJNA350682 | ENA