Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Populus tremula x Populus alba cultivar:717

ABSTRACT: Populus tremula x alba 717 Transcriptome - debarked primary stem (internodes 3-6)

PROVIDER: PRJNA408645 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR6255834_1.fastq.gz	Fastqsanger.gz
	SRR6255834_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

Time Course of Laccaria bicolor S238N and Populus tremula x alba 717-1B4 in vitro ectomycorrhizal development

Project description:Illumina technology was used to generate mRNA profiles of a time course of Laccaria bicolor S238N and Populus tremula x alba 717-1B4 in vitro ectomycorrhizal development. Total RNA was extracted, TruSeq mRNA Stranded libraries were constructed and and sequenced in triplicates (2 x 150 bp Illumina HiSeq3000) at the Genotoul sequencing facilities (Toulouse, France). Raw reads were trimmed for low quality (quality score 0.05), Illumina adapters and sequences shorter than 15 nucleotides and aligned to the L. bicolor v2 reference transcripts available at the JGI database https://mycocosm.jgi.doe.gov/Lacbi2/Lacbi2.home.html using CLC Genomics Workbench v8.

2021-12-15 | GSE190443 | GEO

Single nuclei transcriptomic of Populus tremula x alba apex

Project description:Here we applied a novel approach to isolate nuclei from complex plant tissues (https://doi.org/10.1371/journal.pone.0251149), to dissect the transcriptome profiling of the hybrid poplar (Populus tremula × alba) vegetative shoot apex at single-cell resolution.

2022-10-04 | GSE190649 | GEO

Populus tremula x Populus alba cultivar:717

Project description:Populus tremula x alba 717 Transcriptome - bark, primary stem (internodes 3-6)

| PRJNA408644 | ENA

Populus tremula x Populus alba cultivar:717

Project description:Populus tremula x alba 717 Transcriptome - bark, secondary stem (internodes 12-15)

| PRJNA408646 | ENA

Populus tremula x Populus alba cultivar:717

Project description:Populus tremula x alba 717 Transcriptome - xylem, secondary stem (internodes 12-15)

| PRJNA408647 | ENA

Populus homeobox gene ARK1 overexpression

Project description:The Populus homeobox gene ARBORKNOX1 was overexpressed behind the cauliflower mosaic virus 35S promoter in clone INRA 717 P. alba X P. tremula. The experiment here compares gene expression in defoliated stems of two independently transformed clones (mutants) versus wild type controls. Keywords: mutant versus wildtype

2005-09-01 | GSE2929 | GEO

Populus homeobox gene ARK2 overexpression

Project description:The Populus homeobox gene ARBORKNOX2 was overexpressed behind the cauliflower mosaic virus 35S promoter in clone INRA 717 P. alba X P. tremula. The experiment here compares gene expression in defoliated stems of two independently transformed clones (mutants) versus wild type controls. Keywords: mutant versus wildtype

2005-10-01 | GSE3027 | GEO

Populus tremula x Populus alba cultivar:717

Project description:Populus tremula x alba 717 Transcriptome - callus

| PRJNA411518 | ENA

Populus tremula x Populus alba cultivar:717

Project description:Populus tremula x alba 717 Transcriptome - bud

| PRJNA411519 | ENA

Populus tremula x Populus alba cultivar:717-1B4

Project description:Populus tremula x Populus alba cultivar:717-1B4

| PRJNA237251 | ENA