Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Trnascriptome analysis of HeLa cells infected with rTHOV-wt, -dML, -SW mutant or mock-treated

ABSTRACT: Trnascriptome analysis of HeLa cells infected with rTHOV-wt, -dML, -SW mutant or mock-treated

PROVIDER: PRJNA414970 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR6189800.fastq.gz	Fastqsanger.gz
	SRR6189801.fastq.gz	Fastqsanger.gz
	SRR6189802.fastq.gz	Fastqsanger.gz
	SRR6189793.fastq.gz	Fastqsanger.gz
	SRR6189803.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

Trnascriptome analysis of HeLa cells infected with rTHOV-wt, -dML, -SW mutant or mock-treated

Project description:The goal of the study was to compare transcriptome changes in HeLa cells after infection with recombinant Thogoto virus (wild-type, ML deletioin mutant or ML SW mutant not able to interact wiith TFIIB. While wild-type virus is able to inhibit inflammatory genes, ML deletion mutant and TFIIB-non-interacting mutant lose this effect on gene transcription.

2018-04-01 | GSE105152 | GEO

HeLa/16E6 Cells (Wild-type E2-infected vs. Mock-infected)

Project description:Senescent HeLa/16E6 cells compared to proliferating HeLa/16E6 cells Keywords: Wild-type E2 Infection vs. Mock Infection

2007-01-24 | GSE6758 | GEO

HeLa/16E6 Cells (Wild-type E2-infected vs. Mutant E2-infected)

Project description:Senescent HeLa/16E6 cells compared to proliferating HeLa/16E6 cells Keywords: Wild-type E2 Infection vs. Mutant E2 Infection

2007-01-24 | GSE6759 | GEO

Transcriptomic profiling of HeLa cells infected with Shigella flexneri

Project description:We evaluated the transcriptome changes induced by infection of Hela 229 cells with Shigella flexneri. The sample set consists of a control (mock), total population of infected sample and infected sample sorted into Shigella positive and Shigella negative population.

2017-04-04 | GSE75746 | GEO

WT HeLa total RNA-seq (RiboMinus)

Project description:WT HeLa total RNA-seq (RiboMinus)

| PRJNA454025 | ENA

Exon level expression profiling of mutant U2AF35 transduced HeLa cells

Project description:In this study, to obtain the biological impact of the mutated U2AF35, HeLa cells were retrovirally transduced with either mock, wild-type or S34F mutant of U2AF35, and Exon array was performed.

2011-09-12 | GSE31171 | GEO

Rhodospirillum centenum SW strain:SW

Project description:Rhodospirillum centenum SW strain:SW Transcriptome or Gene expression

| PRJNA258476 | ENA

HeLa/16E6-16E7d21-24 Cells (Wild-type E2-infected vs. Mutant E2-infected)

Project description:Senescent HeLa/16E6-16E7d21-24 cells compared to proliferating HeLa/16E6-16E7d21-24 cells Keywords: Wild-type E2 Infection vs. Mutant E2 Infection

2007-01-24 | GSE6761 | GEO

WT HeLa total RNA-seq (RiboMinus)

Project description:We sequenced total RNA from HeLa WT cells to quantify the expression of protein-coding mRNAs and lincRNAs. RPKM values were used to normalize iCLIP binding to RNA abundance.

2018-10-31 | GSE113812 | GEO

Gene expression changes induced by overexpression of PJA2 in SW-480 cells

Project description:To investigate the impact of PJA2 on the progression of colorectal cancer, we employed lentiviral constructs to establish PJA2-overexpressing SW-480 cell lines. Subsequently, we conducted gene expression profiling analysis using RNA-seq data obtained from both vector SW-480 cells and PJA2-overexpressing SW-480 cells.

2024-08-30 | GSE247535 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data