Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Gene expression analyses of GI eosinophils under homeostatic conditions

ABSTRACT: Gene expression analyses of GI eosinophils under homeostatic conditions

PROVIDER: PRJNA416256 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR6233850.fastq.gz	Fastqsanger.gz
	SRR6233851.fastq.gz	Fastqsanger.gz
	SRR6233852.fastq.gz	Fastqsanger.gz
	SRR6233853.fastq.gz	Fastqsanger.gz
	SRR6233848.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 6

Similar Datasets

Gene expression analyses of GI eosinophils under homeostatic conditions

Project description:RNA-seq was performed on eosinophils isolated from colons of naive C57/BL6 mice.

2018-10-01 | GSE106213 | GEO

Eosinophil specific transcriptome in homeostatic intestine and lung

Project description:Objective: To study the physiological role of eosinophils in the GI tract and lung under homeostatic conditions, Method: we analyzed tissue-specific eosinophil gene expression patterns by genome-wide expression microarray analysis using RNA isolated from FACS-sorted eosinophils from the small intestine or lung of naive BALB/cmice (Live eosinophils were identified as DAPI-CCR3+Siglec-F+CD45+CD4-CD8a-CD19-B220-SSChigh cells). Result: There are 513 genes that are differentially expressed by intestinal eosinophils and Lung eosinophils. Conclusion: Eosinophils from different tissues have unique gene expression patterns for distinct functions. we analyzed tissue-specific eosinophil gene expression patterns by genome-wide expression microarray analysis using RNA isolated from FACS-sorted eosinophils from the small intestine or lung of naive BALB/cmice (Live eosinophils were identified as DAPI-CCR3+Siglec-F+CD45+CD4-CD8a-CD19-B220-SSChigh cells).

2011-11-23 | E-GEOD-33807 | biostudies-arrayexpress

Eosinophil specific transcriptome in homeostatic intestine and lung

2011-11-23 | GSE33807 | GEO

Proteomic analysis of Bacteroides ovatus under varying GI conditions

Project description:Bacteroides ovatus were grown under varying conditions to test their viability under different GI conditions.

2022-01-21 | MSV000088716 | MassIVE

Digital gene expression of WT and gi mutant under control and drought conditions in Arabidopsis

Project description:We report the application of digital gene expression analysis for high-throughput profiling the different gene expression of WT and gi mutant under control and drought conditions. Examination gene expression of WT and gi under control and drought conditions

2013-07-12 | E-GEOD-48810 | biostudies-arrayexpress

Single-cell RNA-sequence of basophils under homeostatic conditions

Project description:Single-cell RNA-sequence of basophils under homeostatic conditions

| PRJNA851436 | ENA

Gene expression analyses of GI eosinophils and macrophages from naive colons and intra-tumor

Project description:Gene expression analyses of GI eosinophils and macrophages from naive colons and intra-tumor

| PRJNA449510 | ENA

Digital gene expression of WT and gi mutant under control and drought conditions in Arabidopsis

2013-07-12 | GSE48810 | GEO

Transcriptomic profiling of blood and adipose-resident eosinophils from mice

Project description:Eosinophils are immune effector cells with beneficial homeostatic roles in fat. Here, bulk RNA-seq profiling revealed distinct transcriptomic signatures in fat-resident eosinophils and circulating eosinophils.

2022-11-10 | GSE217551 | GEO

Single-cell RNA-sequence of basophils under homeostatic conditions

Project description:Basophils are the least common granulocytes which represent less than 1% of peripheral blood leukocytes. Recent development of analytical tools for basophils has enabled us to understand their critical roles in allergic reactions and protection from parasitic infections. Nevertheless, the differentiation trajectory of basophils remain unclear. To explore differentiation trajectory of basophils, we conducted highly sensitive single cell RNA sequencing (scRNA-seq) of bone marrow-derived basophils (BMBAs) and basophils under homeostatic conditions. As a result, we identified previously-unappreciated pre-basophils which are located down-stream of bi-potential basophil and mast cell common precursors and upstream of mature basophils along the ontogeny of basophlis.

2023-03-21 | GSE206589 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data