Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Chickens

ABSTRACT: chickens Metagenome

PROVIDER: PRJNA428831 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR6448400.fastq.gz	Fastqsanger.gz
	SRR6448410.fastq.gz	Fastqsanger.gz
	SRR6448420.fastq.gz	Fastqsanger.gz
	SRR6448430.fastq.gz	Fastqsanger.gz
	SRR6448440.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 60

Similar Datasets

Chickens metagenome

Project description:Chickens metagenome Raw sequence reads

| PRJNA923241 | ENA

Chickens metagenome

Project description:Chickens metagenome Raw sequence reads

| PRJNA923160 | ENA

Russian Chickens

Project description:Russian Chickens

| PRJEB40810 | ENA

Let-7b regulates skeletal muscle growth, development and fat deposition in deletion-type dwarf chickens (7-week-old chickens)

Project description:A deletion mutation in the growth hormone receptor (GHR) gene results in the inhibition of skeletal muscle growth and fat deposition in dwarf chickens. In this study, microarray techniques were used to detect the miRNA and mRNA expression profiles of 14-day-old embryo and 7-week-old chicken skeletal muscle of deletion-type dwarf chickens and normal-type chickens. Skeletal muscle tissues of Dwarf recessive White Rock chickens and normal recessive White Rock chickens were used to make the microarray assay. Results show the expression of miR-1623 and miR-181b in 14-day-old embryos and of let-7b and miR-128 in 7-week-old chickens. let-7b was the only miRNA found to be completely complementary to its target in the 3'UTR of GHR and inhibited GHR gene expression. KEGG (Kyoto Encyclopaedia of Genes and Genomes) pathway analysis and RT-PCR verified that there were three main signalling pathways regulating the skeletal muscle growth and fat deposition of chickens influenced by the let-7b-regulated GHR gene. The suppression of the cytokine signalling 3 (SOCS3) gene was found to be involved in the signalling pathway of adipocytokines. We found that let-7b is the critical miRNA involved in the regulation of the GHR gene. SOCS3 plays a critical role in the network regulating skeletal muscle growth and fat deposition via let-7b-mediated GHR gene expression.

2012-04-18 | GSE37367 | GEO

Metagenome of broiler chickens

Project description:A study of the metagenome of broiler chickens

| PRJEB33644 | ENA

CHICKENS

Project description:Analysis of the Microbial Intestinal Tract in Broiler Chickens

| PRJEB45879 | ENA

layer chickens

Project description:layer chickens Genome sequencing and assembly

| PRJNA855329 | ENA

RNA-Seq for ALV-J-susceptible and ALV-J-resistant chickens

Project description:We bed ALV-J-susceptible and ALV-J-resistant chickens. In this work, we find the different gene expression between ALV-J-susceptible and ALV-J-resistant chickens

2020-12-15 | GSE163135 | GEO

Omics analysis of transgenic chickens compared with non-transgenic chickens

Project description:Omics analysis of transgenic chickens compared with non-transgenic chickens

| PRJNA393334 | ENA

MeDIP-Seq for ALV-J-susceptible and ALV-J-resistant chickens

Project description:We bed ALV-J-susceptible and ALV-J-resistant chickens. In this work, we find the difference DNA methylation states between ALV-J-susceptible and ALV-J-resistant chickens

2020-01-10 | GSE143336 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data