Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Solobacterium moorei F0204

ABSTRACT: Reference genome for the Human Microbiome Project

PROVIDER: PRJNA43121 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR088893_1.fastq.gz	Fastqsanger.gz
	SRR088893_2.fastq.gz	Fastqsanger.gz
	SRR088894_1.fastq.gz	Fastqsanger.gz
	SRR088894_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 7

Similar Datasets

Solobacterium moorei CC57E

Project description:Reference genome for the Human Microbiome Project

| PRJNA71577 | ENA

Solobacterium moorei CC14Y

Project description:Reference genome for the Human Microbiome Project

| PRJNA71575 | ENA

Solobacterium moorei bacteremia: identification, antimicrobial susceptibility, and clinical characteristics.

Project description:We present five cases of Solobacterium moorei bacteremia. The isolates were identified with 16S rRNA gene sequencing and were susceptible to common antibiotics used for anaerobic infections. Bacteremia with S. moorei seems to be associated with debilitating conditions, but the prognosis of the infection appears to be good.

| S-EPMC3147872 | biostudies-literature

Solobacterium moorei

Project description:Solobacterium moorei overview

| PRJNA43155 | ENA

Solobacterium moorei strain:JCM10645

Project description:Solobacterium moorei strain:JCM10645 Genome sequencing and assembly

| PRJNA1013036 | ENA

Solobacterium moorei strain:G0016

Project description:Solobacterium moorei strain:G0016 Genome sequencing and assembly

| PRJNA970483 | ENA

Phenotypic and molecular characterization of Solobacterium moorei isolates from patients with wound infection.

Project description:Though seldom reported, Solobacterium moorei, which was first described in 2000, has been identified in specimens from patients with root canals, periradicular lesions, periodontal disease, dentoalveolar abscesses, bacteremia, septic thrombophlebitis, and halitosis. In the present study, we describe 9 cases of mixed wound infection, from a pool of 400 surgical wound infections that we have studied, in which S. moorei was isolated or found in a clone library. All isolates of S. moorei were identified by 16S rRNA gene sequence analysis, and then six were examined for their physiological and biochemical characteristics and for antimicrobial susceptibility. The results of the present study indicate that Solobacterium moorei may be a significant component in some mixed surgical wound infections and that surgical management and antimicrobial therapy may be indicated when these bacteria are identified in significant situations.

| S-EPMC2832436 | biostudies-literature

First case report of bacteremia caused by Solobacterium moorei in China, and literature review.

Project description:BackgroundSolobacterium moorei, the only species in the genus Solobacterium, is a Gram-positive, non-spore-forming, strict anaerobic, short to long bacillus. It has rarely been documented to cause blood stream infections. Here we report the first case of bacteremia caused by S.moorei in China.Case presentationA 61-year-old male presented to Peking Union Medical College Hospital (Beijing) with thrombotic thrombocytopenic purpura (TTP) and several other underlying diseases. He also had persistent coma accompanied by intermittent convulsions, halitosis, and intermittent fever. Blood cultures taken when the patient had a high fever were positive, with the anaerobic bottle yielding an organism identified as S.moorei by 16S rRNA gene sequencing, whilst the aerobic bottle grew Streptococcus mitis. After replacement of venous pipeline, and empirical use of vancomycin and meropenem, the patient's body temperature and white blood cell count returned to normal. Unfortunately, the patient died of severe TTP.ConclusionThis is the first case report of S. moorei isolation from blood stream in China. 16S rRNA gene sequencing is the only method that can identify S. moorei. Blood cultures must be taken before administration of antibiotics, and anaerobic culture should be considered for such rare pathogens in patients with oral diseases and immune deficiency.

| S-EPMC6700775 | biostudies-literature

Solobacterium moorei DSM 22971

Project description:Solobacterium moorei DSM 22971

| PRJNA188328 | ENA

Bacteremia caused by Solobacterium moorei in a patient with acute proctitis and carcinoma of the cervix.

Project description:We describe a case of Solobacterium moorei bacteremia in a 43-year-old woman presenting with acute proctitis complicating radiotherapy for cervical carcinoma. Phenotypic tests failed to identify the bacterium, which was subsequently identified by 16S rRNA gene sequencing. 16S rRNA gene sequencing could help better define the pathogenicity of S. moorei.

| S-EPMC1594659 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data