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Transcriptome analysis of Streptomyces natalensis HW-2 to fungal elicitor using RNA-sequencing

ABSTRACT: Transcriptome analysis of Streptomyces natalensis HW-2 to fungal elicitor using RNA-sequencing

PROVIDER: PRJNA448178 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR6921505_1.fastq.gz	Fastqsanger.gz
	SRR6921505_2.fastq.gz	Fastqsanger.gz
	SRR6921506_1.fastq.gz	Fastqsanger.gz
	SRR6921506_2.fastq.gz	Fastqsanger.gz
	SRR6921507_1.fastq.gz	Fastqsanger.gz

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Transcriptome analysis of Streptomyces natalensis HW-2 to fungal elicitor using RNA-sequencing

Project description:To characterize the differentially expressed genes between adding fungal elicitor and without fungal elicitor on Streptomyces natalensis HW-2

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Transcriptome analysis of Streptomyces natalensis HW-2 to valine using RNA-sequencing

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Project description:In this work, we demonstrate that the addition of the small molecule elicitor ARC2 to Streptomyces coelicolor cultures results in global changes in gene expression including many secondary metabolic genes. A profile of the Streptomyces coelicolor transcriptome in the absence and presence of ARC2 was performed by RNA-seq. Total RNA was extracted after 10 hours of treatment with either the DMSO solvent control or the ARC2 small molecule elicitor. A V2 rapid run mode with paired-end 2x75 bp reads on the Illumina HiSeq platform was performed for RNA sequencing.

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