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Enzyme promiscuity shapes evolutionary innovation and optimization

ABSTRACT: Enzyme promiscuity shapes evolutionary innovation and optimization

PROVIDER: PRJNA471071 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR7154640_1.fastq.gz	Fastqsanger.gz
	SRR7154640_2.fastq.gz	Fastqsanger.gz
	SRR7154631_1.fastq.gz	Fastqsanger.gz
	SRR7154631_2.fastq.gz	Fastqsanger.gz
	SRR7154641_1.fastq.gz	Fastqsanger.gz

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Enzyme promiscuity shapes evolutionary innovation and optimization

Project description:A computational model of underground metabolism and laboratory evolution experiments were employed to examine the role of enzyme promiscuity in the acquisition and optimization of growth on predicted non-native substrates in E. coli K-12 MG1655. After as few as 20 generations, the evolving populations repeatedly acquired the capacity to grow on five predicted novel substrates--D-lyxose, D-2-deoxyribose, D-arabinose, m-tartrate, and monomethyl succinate--none of which could support growth in wild-type cells. Promiscuous enzyme activities played key roles in multiple phases of adaptation. Potential mechanisms for optimizing growth on the non-native carbon sources were explored by analyzing the transcriptomes of initial and endpoint populations.

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