Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Bacteria

ABSTRACT: Single cell genomes and metagenomic pan genomes of oral bacteria from candidate division TM7 (Saccharibacteria) Genome sequencing and assembly

PROVIDER: PRJNA472398 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR9899540.fastq.gz	Fastqsanger.gz
	SRR9899541.fastq.gz	Fastqsanger.gz
	SRR9899542.fastq.gz	Fastqsanger.gz
	SRR9899543.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 16

Similar Datasets

Candidatus Absconditabacteria

Project description:Single cell genomes and metagenomic pan genomes of oral bacteria from candidate division SR1 Genome sequencing and assembly

| PRJNA352960 | ENA

Ultrasmall epiparasitic Saccharibacteria suppresses gingival inflammation and bone loss through host bacterial modulation

Project description:Saccharibacteria (TM7) are obligate epibionts living on the surface of their host bacteria, and strongly correlated with dysbiotic microbiomes during periodontitis and other inflammatory diseases, suggesting they are putative pathogens. However, due to the recalcitrance of TM7 cultivation, no causal research has been conducted to investigate their role in inflammatory diseases. Here, we isolated multiple TM7 species on their host bacteria from periodontitis patients. These TM7 species reduced inflammation and consequential bone loss by modulating their host bacterial pathogenicity in mouse ligature-induced periodontitis model. Two host bacterial functions involved in collagen binding and utilization of eukaryotic sialic acid were identified as required for inducing bone loss and altered by TM7 association. This down-regulation of host bacterial pathogenicity by TM7 was shown for multiple TM7/host bacteria pairs, suggesting that, in contrast to their suspected pathogenic role, TM7 could protect mammalian hosts from inflammatory damage induced by their host bacteria.

2023-03-11 | PXD026999 | Pride

candidate division TM7 genomosp. GTL1

Project description:candidate division TM7 genomosp. GTL1 overview

| PRJNA36185 | ENA

uncultured Candidatus Saccharibacteria bacterium

Project description:uncultured candidate division TM7 bacterium overview

| PRJNA169648 | ENA

candidate division TM7 bacterium JGI 0001002-L20

Project description:candidate division TM7 bacterium JGI 0001002-L20

| PRJNA176055 | ENA

candidate division TM7 bacterium JGI 0001002-L20

Project description:candidate division TM7 bacterium JGI 0001002-L20 overview

| PRJNA176176 | ENA

candidate division TM7 single-cell isolate TM7c

Project description:candidate division TM7 single-cell isolate TM7c overview

| PRJNA36063 | ENA

candidate division TM7 single-cell isolate TM7b

Project description:candidate division TM7 single-cell isolate TM7b overview

| PRJNA36061 | ENA

candidate division TM7 single-cell isolate TM7a

Project description:candidate division TM7 single-cell isolate TM7a overview

| PRJNA36059 | ENA

Bacteria and fungi

Project description:The sequencing raw data including 10 different phyla (Acidobacteria, Actinobacteria, Bacteria-unclassified, Bacteroidetes, Candidate-division-TM7, Cyanobacteria, Firmicutes, Fusobacteria, Proteobacteria, Tenericutes) of bacteria and 2 phyla of fungi

| PRJNA296934 | ENA

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data