Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Escherichia coli O111:NM strain:98-8338

ABSTRACT: Escherichia coli O111:NM strain:98-8338 Genome sequencing and assembly

PROVIDER: PRJNA478006 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR7627955.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

Escherichia coli O111:NM strain:00-4748

Project description:Escherichia coli O111:NM strain:00-4748 Genome sequencing and assembly

| PRJNA478003 | ENA

Escherichia coli O111:NM strain:3007-85

Project description:Escherichia coli O111:NM strain:3007-85 Genome sequencing and assembly

| PRJNA478015 | ENA

Trout macrophages: Control vs. Escherichia coli PGNs from strains O111:B4 and K12

Project description:We evaluated both the transcriptomic and inflammatory response in trout (O. mykiss) macrophages in primary cell culture stimulated with DAP-PGN (DAP; meso-diaminopimelic acid, PGN; peptidoglycan) from two strains of Escherichia coli (PGN-K12 and PGN-O111:B4) over time. Transcript profiling was assessed using function-targeted cDNA microarrays hibridation (n = 36) to differential responses to both PGNs that are both time and treatment dependen over trout macrophages. Wild type E. coli (K12) generated an increase in transcript number/diversity over time whereas PGN-O111:B4 stimulation resulted in a more specific and intense response. In line with this gene Ontology analysis (GO) highlights a specific transcriptomic remodelling for PGN-O111:B4 whereas results obtained for PGN-K12 shows a high similarity with a general LPS response where multiple functional classes are related to ribosome biogenesis or cellular metabolism

2010-06-16 | GSE22330 | GEO

Trout macrophages: Control vs. Escherichia coli PGNs from strains O111:B4 and K12

2010-06-15 | E-GEOD-22330 | biostudies-arrayexpress

Escherichia coli O111

Project description:Escherichia coli O111 Genome sequencing and assembly

| PRJNA736395 | ENA

Escherichia coli O111 str. RM9322

Project description:Escherichia coli O111 str. RM9322 genome sequencing

| PRJNA69929 | ENA

Escherichia coli strain:98

Project description:Escherichia coli strain:98 Genome sequencing

| PRJNA605514 | ENA