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Nucleosome positioning - Transient Depletion and Recovery of the Essential RSC Chromatin Remodeling Complex

ABSTRACT: Nucleosome positioning - Transient Depletion and Recovery of the Essential RSC Chromatin Remodeling Complex

PROVIDER: PRJNA484877 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR7586910_1.fastq.gz	Fastqsanger.gz
	SRR7586910_2.fastq.gz	Fastqsanger.gz
	SRR7586920_1.fastq.gz	Fastqsanger.gz
	SRR7586920_2.fastq.gz	Fastqsanger.gz
	SRR7586930_1.fastq.gz	Fastqsanger.gz

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Nucleosome positioning - Transient Depletion and Recovery of the Essential RSC Chromatin Remodeling Complex [RNA-Seq]

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Project description:we use an induced degron system to study how rapid clearance of ATP-dependent chromatin remodelers affect nucleosome locations. 1. Screening eight remodelers 2. depletion of Sth1 leads to rapid and reversible fill-in of nucleosome-free regions at gene promoters. 3. changes at depletion and recovery do not depend on major chromatin reassembly during DNA replication. 4. RSC is crucial in maintaining open promoters of low expressed genes. RSC is not directly required for an acute transcriptional response. 5. Changes in nucleosome positions are tightly related to the specific TSS usage at promoters.

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