Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Semibalanus balanoides

ABSTRACT: Semibalanus balanoides overview

PROVIDER: PRJNA489119 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR1653238_1.fastq.gz	Fastqsanger.gz
	SRR1653238_2.fastq.gz	Fastqsanger.gz
	SRR8117850_1.fastq.gz	Fastqsanger.gz
	SRR8117850_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 68

Similar Datasets

Semibalanus balanoides

Project description:Semibalanus balanoides Transcriptome or Gene expression

| PRJNA496531 | ENA

Semibalanus balanoides isolate:JCBN2019

Project description:Semibalanus balanoides isolate:JCBN2019 Genome sequencing and assembly

| PRJNA557548 | ENA

Semibalanus balanoides isolate:SBAL2_MERISW

Project description:Semibalanus balanoides isolate:SBAL2_MERISW Genome sequencing and assembly

| PRJNA407210 | ENA

Semibalanus balanoides

Project description:Multiple populations from the North Pacific and the North Atlantic of the northern acorn barnacle Semibalanus balanoides Raw sequence reads

| PRJNA560680 | ENA

Semibalanus cariosus

Project description:Semibalanus cariosus overview

| PRJNA931409 | ENA

Semibalanus cariosus

Project description:Semibalanus cariosus

| PRJNA931336 | ENA

Semibalanus balanoides

Project description:The 1KITE project: evolution of insects

| PRJNA254310 | ENA

Microbiome acquisition during larval settlement of the barnacle Semibalanus balanoides.

Project description:Barnacles are conspicuous members of rocky intertidal communities and settlement of the final larval stage, the cyprid, is influenced by the presence of biofilms. While modulation of cyprid settlement by biofilms has been studied extensively, the acquisition of a specific microbiome by the settling larva has not. This study investigated settlement in the field of Semibalanus balanoides in two consecutive years when the composition of the benthic bacterial community differed. In both years, settling cyprids adopted a specific sub-set of benthic bacteria that was distinct from the planktonic cyprid and the benthos. This microbiome was consistent, regardless of annual variability in the benthic community structure, and established within hours of settlement. The results imply that a natural process of selection occurs during the critical final transition of S. balanoides to the sessile form. The apparent consistency of this process between years suggests that optimal growth and survival of barnacles could depend upon a complex inter-kingdom relationship, as has been demonstrated in other animal systems.

| S-EPMC6597511 | biostudies-literature

Towards a nanomechanical basis for temporary adhesion in barnacle cyprids (Semibalanus balanoides).

Project description:Cypris larvae of barnacles are able to use a rapidly reversible temporary adhesion mechanism for exploring immersed surfaces. Despite decades of research interest, the means by which cyprids maintain attachment with surfaces prior to permanent settlement remain poorly understood. Here, we present novel observations on the morphology of 'footprints' of a putative adhesive secretion deposited by cyprids during surface exploration. Atomic force microscopy (AFM) was used to image footprints at high resolution and to acquire measurements of interaction forces. R-CH3- and R-NH2-terminated glass surfaces were used for comparison of footprint morphology, and it was noted that on R-NH2 each footprint comprised three times the volume of material deposited for footprints on R-CH3. Direct scaling of adhesion forces derived from AFM measurements did not adequately predict the real attachment tenacity of cyprids, and it is suggested that a mixture of 'wet' and 'dry' adhesive mechanisms may be at work in cyprid adhesion. High-resolution images of cyprid footprints are presented that correlate well with the known morphology of the attachment structures.

| S-EPMC2607389 | biostudies-literature

Characterizing the cirri and gut microbiomes of the intertidal barnacle Semibalanus balanoides.

Project description:BackgroundNatural populations inhabiting the rocky intertidal experience multiple ecological stressors and provide an opportunity to investigate how environmental differences influence microbiomes over small geographical scales. However, very few microbiome studies focus on animals that inhabit the intertidal. In this study, we investigate the microbiome of the intertidal barnacle Semibalanus balanoides. We first describe the microbiome of two body tissues: the feeding appendages, or cirri, and the gut. Next, we examine whether there are differences between the microbiome of each body tissue of barnacles collected from the thermally extreme microhabitats of the rocky shores' upper and lower tidal zones.ResultsOverall, the microbiome of S. balanoides consisted of 18 phyla from 408 genera. Our results showed that although cirri and gut microbiomes shared a portion of their amplicon sequence variants (ASVs), the microbiome of each body tissue was distinct. Over 80% of the ASVs found in the cirri were also found in the gut, and 44% of the ASVs found in the gut were also found in the cirri. Notably, the gut microbiome was not a subset of the cirri microbiome. Additionally, we identified that the cirri microbiome was responsive to microhabitat differences.ConclusionResults from this study indicate that S. balanoides maintains distinct microbiomes in its cirri and gut tissues, and that the gut microbiome is more stable than the cirri microbiome between the extremes of the intertidal.

| S-EPMC7807441 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data