Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Expression data from liver tissue of mice (Mus musculus)

ABSTRACT: Expression data from liver tissue of mice (Mus musculus)

PROVIDER: PRJNA493128 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Contrasting patterns of expression divergence in early and late stages of population divergence in mice

Project description:We compared gene expression differences in the polytypic species complex Mus musculus (Mus musculus musculus, Mus musculus domesticus, Mus musculus castaneus and Mus musculus ssp) with that of Mus spretus via oligonucleotide microarrays representing more than 20,000 genes. Analysis of the results by two way ANOVA statistics suggests that the most genes with significant differences in expression levels among the subspecies are found in liver and kidney and the least in testis. This picture is different when one compares with Mus spretus, where the largest number of differences is found in testis. The design we employed is a reference design. All tissues were hybridized against a pool of that same tissue from 9 C57BL6 mice. All mice were roughly 12 weeks of age. To control for biological variation, we have used several individual males from each sub-species. RNA was isolated from three different organs, namely brain, liver/kidney and testis.

2010-06-30 | E-GEOD-2597 | biostudies-arrayexpress

Contrasting patterns of expression divergence in early and late stages of population divergence in mice

2006-12-13 | GSE2597 | GEO

snRNA-seq on hippocampus (Hip) and prefrontal lobe cortex (PFC) tissue in mice

Project description:We performed high-throughput snRNA-seq on hippocampus (Hip) and prefrontal lobe cortex (PFC) tissue in mice (Mus musculus) to identify cell-type specific differentially expressed genes. Mice were divided into GF, SPF and CGF group.

2023-03-15 | GSE202704 | GEO

Differential gene expression analysis of murine liver and kidney following exposure to malarial parasite

Project description:Global changes in murine liver and kidney transcriptome were analyzed following different levels of malarial parasite infection.Known levels of parasites were injected in mice and transcriptomic changes were recorded with comparison to control non infected healthy mice. Two color ,Organism: Mus Musculus, Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) "

2012-07-31 | E-GEOD-31686 | biostudies-arrayexpress

ob mice liver tissue sequencing

Project description:ob mice liver tissue sequencing

| PRJEB4599 | ENA

Male mus musculus transcriptomes from whole liver tissue

Project description:Male mus musculus transcriptomes from whole liver tissue

| PRJNA638359 | ENA

RNA-seq for liver tissue in mice

Project description:RNA-seq for liver tissue in mice

| PRJNA1103184 | ENA

AlkB-facilitated RNA methylation sequencing (ARM-seq) and Demethylase-thermostable group II intron RT tRNA sequencing (DM-tRNA-seq) [liver]

Project description:The goal of this study was to determine the state of the tRNA transcriptome in Liver tissue of Mus Musculus (Mouse). This includes expression data of mature tRNAs and tRNA fragments (tRFs), as well as associated modification states of these RNAs assessed using mismatching percentages from sequencing data.

2019-11-08 | GSE140096 | GEO

Gene expression data from mouse postnatal brain development

Project description:In development, timing is of the utmost importance, and the timing of various developmental processes are often changed during evolution. We measured the timing of gene expression changes in the brains of two species of mice throughout postnatal development. Mus musculus and Mus spretus mice were bred at the MPI-EVA mouse facility. Whole brain samples were collected from mice of 3 different age classes: newborns, pups and young adults. RNA extracted from the dissected tissue was hybridized to Affymetrix MG-430 2.0 GeneChip arrays.

2009-03-09 | E-GEOD-11528 | biostudies-arrayexpress

Proteomes of vaginal fluids during the estrous cycle in wild house mice.

Project description:We provide proteomes of vaginal fluid in three phases of the estrous cycle – proestrus, estrus and metestrus in six adult females of wild mice Mus musculus musculus. The total of 1167 particular proteins were identified by label-free nano- scale liquid chromatography tandem mass spectrometry (nLC-MS 2 ).

2024-05-24 | PXD039239 | Pride

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data