Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Anopheles gambiae

ABSTRACT: Lake Victoria Basin Anopheles gambiae whole genome sequences

PROVIDER: PRJNA493853 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR10235300_1.fastq.gz	Fastqsanger.gz
	SRR10235300_2.fastq.gz	Fastqsanger.gz
	SRR10235400_1.fastq.gz	Fastqsanger.gz
	SRR10235400_2.fastq.gz	Fastqsanger.gz
	SRR10235301_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 247

Similar Datasets

Transcriptional profiling across adult Anopheles gambiae age

Project description:Whole genome transcription was quantified in adult female and male Anopheles gambiae atdifferent ages; 0 (0-24 h), 10, 20 and 30 days post-eclosion. The objective of the experiment was to identify genes with significant age-dependent transcription.

2010-01-01 | GSE18194 | GEO

Anopheles gambiae brain proteomic analysis

Project description:Proteomic analysis of Anopheles gambiae brain tissue after in-gel trypsin digestion. To gain insights into neurobiology of the Anopheles gambiae mosquito, we carried out a proteomic analysis of its brain using a comprehensive proteomic approach.

2016-12-20 | PXD000630 | Pride

Anopheles gambiae body parts

Project description:The transcriptional profile of four tissues for the multi insecticide Anopheles gambiae (Tiassale) and lab susceptible Anopheles gambiae strain N'Gousso. The malpighian tubules, abodmen integument (containing the fat body epidermal, neuronal, muscle and oenocyte cells), midgut and remaining structures were dissected and compared two ways: (i) each body part against the corresponding whole organism (ii) resistant against corresponding susceptible body parts.

2014-08-29 | E-MTAB-2808 | biostudies-arrayexpress

Anopheles gambiae

Project description:Anopheles gambiae

| PRJNA36581 | ENA

Transcriptome analysis of virgin and mated Anopheles gambiae and Anopheles albimanus

Project description:We custom-built a bioinformatics pipeline to search for 20E-modifying enzymes in the accessory glands of Anopheles gambiae males, searching for ecdysteroid kinases (EcK), ecdysone oxidases (EO), and ecdysteroid-phosphate phosphatases (EPP). To this end, we generated RNAseq datasets of different An. gambiae tissues dissected from virgin and mated females and males, and produced similar datasets for Anopheles albimanus, a South American species that does not synthetize and transfer ecdysteroids during mating. These analyses led to the identification of one candidate EPP and two potential EcKs (EcK1 and EcK2), which we demonstrated are involved in the activity of a male-specific oxidized ecdysteroid (3D20E). We further determined that 3D20E is specifically produced by the An. gambiae male accessory glands and is transferred to females during copulation, where it triggers a series of post-mating responses.

2022-04-20 | GSE198665 | GEO

Anopheles gambiae

Project description:Anopheles gambiae Genome sequencing

| PRJNA1159338 | ENA

The salivary transcriptome of Anopheles gambiae (Diptera: Culicidae) larvae: A microarrray-based study

Project description:In spite of the many recent developments in the field of vector sialomics, the salivary glands of larvalmosquitoes have been largely unexplored. We used whole-transcriptome microarray analysis to create a gene-expression profile of the salivary gland tissue of fourth-instar Anopheles gambiae larvae, and compare it to the gene-expression profile of a matching group of whole larvae. We identified a total of 221 probes with expression values that were (a) significantly enriched in the salivary glands, and (b)sufficiently annotated as to allow the prediction of the presence/absence of signal peptides in their corresponding gene products. Based on available annotation of the protein sequences associated with these probes, we propose that the main roles of larval salivary secretions include: (a) immune response, (b) mouthpart lubrication, (c) nutrient metabolism, and (d) xenobiotic detoxification. Other highlights of the study include the cloning of a transcript encoding a previously unknown salivary defensin (AgDef5), the confirmation of mucus secretion by the larval salivary glands, and the first report of salivary lipocalins in the Culicidae. Keywords: Anopheles gambiae, salivary gland, Diptera, gene expression, salivary defensin, transcriptome, salivary lipocalin

2008-05-01 | GSE9642 | GEO

Anopheles gambiae strain:Giles

Project description:Population genetic analysis of the malaria vector Anopheles gambiae Giles in northwestern Lake Victoria, Uganda

| PRJNA344468 | ENA

Anopheles gambiae

Project description:Multi-isolate Anopheles gambiae

| PRJNA60385 | ENA

Anopheles gambiae

Project description:Anopheles gambiae testes Transcriptome

| PRJNA350296 | ENA