Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Whole genome resequencing of liver in mice model

ABSTRACT: Whole genome resequencing of liver in mice model

PROVIDER: PRJNA495473 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR7992490_1.fastq.gz	Fastqsanger.gz
	SRR7992490_2.fastq.gz	Fastqsanger.gz
	SRR7992500_1.fastq.gz	Fastqsanger.gz
	SRR7992500_2.fastq.gz	Fastqsanger.gz
	SRR7992510_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 48

Similar Datasets

Whole genome resequencing of liver in mice model

Project description:Four groups of C57 mice were gavaged with CMC, ethanol, DEHP and ethanol+DEHP for 28 continuous days. At the end of the experiment, livers were harvested to carry out Whole genome resequencing, we found that metabolism related genes were significantly changed in the DEHP and ethanol+DEHP groups compared with control groups, but there was no significant change between them.

2019-01-01 | GSE121057 | GEO

RNA resequencing of liver in liver-specific-Pparg knockout mice model

Project description:RNA resequencing of liver in liver-specific-Pparg knockout mice model

| PRJNA671593 | ENA

RNA resequencing of liver in liver-specific-Pparg knockout mice model

Project description:Two groups of liver-specific-Pparg knockout C57 mice were gavaged with CMC or DEHP for 28 continuous days. At the end of the experiment, livers were harvested for RNA-seq, we found that metabolism related genes were significantly changed by DEHP in paralell with the PPAR signaling pathway.

2021-04-01 | GSE160004 | GEO

RNA resequencing of liver in macrophage-specific-Pparg knockout mice model

Project description:RNA resequencing of liver in macrophage-specific-Pparg knockout mice model

| PRJNA673131 | ENA

RNA resequencing of liver in macrophage-specific-Pparg knockout mice model

Project description:Wild type and macrophage-specific-Pparg knockout C57 mice were gavaged with CMC or DEHP for 28 or 90continuous days. At the end of the experiment, livers were harvested for RNA-seq. Data analysis revealed that DEHP induced remarkable changes of lipid metabolic genes in liver, and that loss of Pparg in hepatic macrophages significantly abrogated the elevation of gene overexpression associated with fatty acid metabolism.

2021-04-01 | GSE160373 | GEO

Whole genome profiling of whole liver lysates of vehicle and Sorafenib-treated iAST mice

Project description:Analysis of changes in gene expression upon Sorafenib treatment. Looking for candidates, that could potentially be up- or down-regulated upon Sorefanib treatment. Total RNA were optained from whole liver lysates of vehicle 14d-, Sorafenib 14d- and LT Sorafenib-treated iAST mice

2014-06-20 | E-GEOD-54857 | biostudies-arrayexpress

Grapevine whole genome resequencing

Project description:Whole genome resequencing of multiple Vitis sp. genotypes

| PRJEB44017 | ENA

Rabbit whole genome resequencing

Project description:Whole Genome sequences of Rabbits with varied phenotype

| PRJEB28783 | ENA

Whole genome survey of the obesity model lean congenic mice B6.C-D7Mit353

Project description:We have analyzed the differential expression between the obesity model lean congenic B6.C-D7Mit353 (1) and the background C57BL/6J strains, in four different tissues of male mice: Brain, GWAT (Gonadal White Adipose Tissue), liver and muscle (gastrocnemius). From the 32,381 mouse genes covered by the Applied Biosystems AB1700 microarray system, we identified 330 genes passing FDR at 5% and 188 genes passing FDR at 1%, in any one of the four tissues examined. None of the genes that passed FDR testing were in the congenic donor region. 65 genes from the 8 megabases congenic region were assayed; only six genes (Thrsp, Kctd14, Myo7a, Capn5, Dgat2 and Mtap6) passed statistical significance filtering but not FDR filtering. (1) Diament & Warden 2004: PMID 14569280. Keywords: Congenic mice whole genome gene expression survey

2007-12-01 | GSE7431 | GEO

Liver-specific DICER1 syndrome model mice develop cystic liver tumors with defective primary cilia

Project description:Liver-specific DICER1 syndrome model mice develop cystic liver tumors with defective primary cilia

| PRJNA966139 | ENA