Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

RNAseq on induced endoreplicating S2 cells

ABSTRACT: RNAseq on induced endoreplicating S2 cells

PROVIDER: PRJNA501888 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR8136340.fastq.gz	Fastqsanger.gz
	SRR8136341.fastq.gz	Fastqsanger.gz
	SRR8136342.fastq.gz	Fastqsanger.gz
	SRR8136343.fastq.gz	Fastqsanger.gz
	SRR8136335.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 9

Similar Datasets

RNAseq S2 Clamp RNAi knockdown

Project description:RNAseq S2 Clamp RNAi knockdown

| PRJEB112555 | ENA

siRNA sequencing S2 cells

Project description:siRNA sequencing S2 cells

| PRJEB113838 | ENA

MNase-seq of Drosophila S2 cells

Project description:We report the MNase-diestion coupled to Next Generation Sequencing of Wild type Drosophila S2 cells or S2 cells over-expressing polycomb protein PH

2022-02-12 | GSE181967 | GEO

RNAseq on induced endoreplicating S2 cells

Project description:RNA-Seq was used In order to evaluate the global transcriptomic changes of CycA dsRNA and Myb dsRNA induced endoreplicating cells (iECs) in DrosophilaS2-DGRC cells. CycA dsRNA and Myb dsRNA iECs mRNA levels were compared to control mitotic cycling cells treated in parallel with GFP dsRNA, in three biological replicates. The RNA-Seq results indicated that a switch from mitotic cycles to endoreplication is associated with up and down regulation of thousands of genes. Comparison of the CycA dsRNA and Myb dsRNA iEC transcriptomes revealed that they shared a total of 966 genes that were differentially expressed compared to mitotic cycling controls

2019-06-22 | GSE121955 | GEO

S2 cells transfected with Clk

Project description:S2 cells transfected with pAc-Clk or empty vector Keywords: S2 cells Clk

2007-07-09 | GSE7653 | GEO

Effect of Shavenbaby on gene expression in S2 cells [RNAseq_S2]

Project description:Shavenbaby (Svb) transcription factor is involved in the differenciation of epidermal cells, the homeostasis of intestinal stem cell. Svb is first synthetized as a long repressor protein called SvbRepressor (SvbREP). In presence of Pri peptides Svb Repressor is clived by the proteasoome into a shorter activator protein called Svb Activator (SvbACT). We want in this study determine the effect of the two Svb forms on gene expression and determine the Svb target genes. We performed RNAseq experiment in S2 cell lines which present Svb REP or SvbACT or S2 cell without Svb.

2022-12-14 | GSE199511 | GEO

small RNA from S2 cells (S2-NP)

Project description:High-throughput sequencing of Drosophila melanogaster small RNAs from S2 cells. total RNA, ~18-26nt RNAs isolated using PAGE, ligation to adapters requires 5' monophosphate and 3' OH For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODEDataReleasePolicyFinal2008.pdf

2009-04-30 | GSE14849 | GEO

RNAseq S2 Clamp RNAi knockdown

Project description:Three biological replicates of RNA-seq were performed using S2 cells incubated for 72 hours with RNAi targeting Clamp or LacZ (control) transcripts. For each target, 10 µg of each purified dsRNA was combined to a total of 30 µg and directly added to 1.5 × 10⁶ S2 cells seeded in a 6-well plate. Cells were incubated for 72 hours at 25 °C. Total RNA was extracted from treated cells using the RNeasy Mini Kit (Qiagen, 74104). RNA-seq libraries were prepared from the isolated RNA using the NEBNext UltraExpress RNA Library Prep Kit (NEB, E3330S), following the manufacturer’s protocol. Libraries were sequenced on an Illumina NextSeq 2000 platform, generating 122-base single-end reads.

2026-08-04 | E-MTAB-17016 | biostudies-arrayexpress

RNAseq data from mtDNA mutator induced pluripotent stem cells

Project description:RNAseq data from mtDNA mutator induced pluripotent stem cells

| PRJNA550531 | ENA

CLKGR in S2 cells

Project description:Experiments performed in S2 cells to identify direct CLK targets Keywords: CLK targets

2007-07-09 | GSE7644 | GEO