Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Camponotus floridanus

ABSTRACT: a carpenter ant native to the southeastern United States.

PROVIDER: PRJNA50189 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	AEAB01.dat.gz	Other
	AEAB01.fasta.gz	Fasta.gz
	AEAB01.master.dat	Other
	SRR13799200.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 865

Similar Datasets

A chromatin link to caste identity in the carpenter ant Camponotus floridanus

2012-11-26 | GSE37523 | GEO

A chromatin link to caste identity in the carpenter ant Camponotus floridanus

Project description:The goal of this study was to assay the extent of variation in chromatin organization between 3 ant castes (major and minor female workers and males) in one colony of Camponotus floridanus carpenter ant using ChIPseq. 45 samples total: 30 ChIP samples and 3 inputs for total histone H3, 7 histone H3 PTMs and RNA Pol II in major, minor, and male ants; CBP in major and minor ants; the major H3K27ac sample was replicated. 4 ChIP samples for H3 and H3K27ac in brains of majors and minors, and 2 inputs. 2 RNAseq samples for major and minor ants head+thorax; 4 RNAseq samples for brain (majors and minors with 2 replicates each).

2012-11-26 | E-GEOD-37523 | biostudies-arrayexpress

Camponotus floridanus

Project description:A chromatin link to caste identity in the carpenter ant Camponotus floridanus

| PRJNA161007 | ENA

Camponotus floridanus

Project description:Epigenetic (re)programming of caste-specific behavior in the ant Camponotus floridanus

| PRJNA285839 | ENA

Camponotus fellah

Project description:Identification of genes involved in social isolation response in carpenter ant, Camponotus fellah

| PRJDB14708 | ENA

Genomic comparison of the ants Camponotus floridanus and Harpegnathos saltator.

Project description:The organized societies of ants include short-lived worker castes displaying specialized behavior and morphology and long-lived queens dedicated to reproduction. We sequenced and compared the genomes of two socially divergent ant species: Camponotus floridanus and Harpegnathos saltator. Both genomes contained high amounts of CpG, despite the presence of DNA methylation, which in non-Hymenoptera correlates with CpG depletion. Comparison of gene expression in different castes identified up-regulation of telomerase and sirtuin deacetylases in longer-lived H. saltator reproductives, caste-specific expression of microRNAs and SMYD histone methyltransferases, and differential regulation of genes implicated in neuronal function and chemical communication. Our findings provide clues on the molecular differences between castes in these two ants and establish a new experimental model to study epigenetics in aging and behavior.

| S-EPMC3772619 | biostudies-literature

Camponotus floridanus

Project description:Time-course RNASeq of Camponotus floridanus forager and nurse brains

| PRJNA704762 | ENA

Camponotus floridanus

Project description:Whole-body RNA-seq from Camponotus floridanus workers and queen

| PRJNA327092 | ENA

Camponotus floridanus

Project description:Camponotus floridanus Transcriptome or Gene expression

| PRJNA263478 | ENA

Camponotus floridanus

Project description:Whole body RNA-seq from developmental stages of Camponotus ants