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Transcriptomic and epigenomic analysis of endoplasmic reticulum stress signaling in mouse primary hepatocytes and liver

ABSTRACT: Transcriptomic and epigenomic analysis of endoplasmic reticulum stress signaling in mouse primary hepatocytes and liver

PROVIDER: PRJNA505436 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR8197280.fastq.gz	Fastqsanger.gz
	SRR8197281.fastq.gz	Fastqsanger.gz
	SRR8197282.fastq.gz	Fastqsanger.gz
	SRR8197283.fastq.gz	Fastqsanger.gz
	SRR8197276.fastq.gz	Fastqsanger.gz

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Transcriptomic analysis of endoplasmic reticulum stress (ERS) regulated genes in mouse primary hepatocytes.

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Project description:We obtained transcriptional profiles of third instar eye imaginal disc nuclei with or without endoplasmic reticulum stress using next generation sequencing (NGS). We employed an isolation of nuclei tagged in specific cell type (INTACT) protocol (Ma and Weake, J. of Vis. Exp., 2014) to label nuclear membranes of GMR-GAL4-expressing cells with EGFP. The experimental group also expressed a mutant allele of the membrane visual protein rhodopsin (Rh-1(G69D)), which is known to cause endoplasmic reticulum stress and initiate Unfolded Protein Response (UPR) signaling. The goal of this study was to characterize the transcriptional changes associated with endoplasmic reticulum stress responses in a commonly used platform, the eye imaginal disc.

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