Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Bacteria

ABSTRACT: Cypermethrin-degrading and biosurfactant-producing bacterial strains isolated from the Northern Chilean Patagonia Genome sequencing and assembly

PROVIDER: PRJNA514341 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	VBTO01.dat.gz	Other
	VBTO01.fasta.gz	Fasta.gz
	VBTO01.master.dat	Other

Items per page:

1 - 4 of 4

Similar Datasets

Project description:Genome sequencing of biosurfactant-producing bacterial strains isolated from soil

| PRJNA947114 | ENA

Bacterial communities from seawater microplastics of the Northern Chilean Patagonia

Project description:Bacterial communities from seawater microplastics of the Northern Chilean Patagonia Metagenome

| PRJNA734021 | ENA

Pseudozyma hubeiensis

Project description:A biosurfactant producing yeast

| PRJNA203436 | ENA

Comparative proteome analysis of the dish pathogen Renibacterium salmoninarum grown under rich- and iron‐limited conditions

Project description:Proteomic analysis of iron restriction of the marine pathogen Renibacterium salmoninarum that causes the disease (BKD), in this study two isolated Chilean H-2 strains and the type strain ATCC33209 have been used. These results show that changes are generated at the level of protein expression in pathways involved in iron metabolism and uptake.

2021-11-29 | PXD024459 | Pride

Transcription profiling analysis of the PecS regulon of Erwinia chrysanthemi 3937

Project description:Pathogenicity of the phytopathogenic enterobacterium Erwinia chrysanthemi, the causative agent of soft rot disease in many plants, is a complex process involving several factors whose production is subject to temporal regulation during infection. After penetrating into its host plant, E. chrysanthemi resides latently in the plant intercellular spaces without provoking any symptoms, and disease occurs only when the environmental conditions are favourable for massive bacterial multiplication and production of plant cell wall degrading enzymes. PecS is a transcriptional regulator of the MarR family that represses production of plant cell wall degrading enzymes. Here, we used microarray analysis to define the PecS regulon and demonstrated that PecS exerts wide-ranging effects on gene expression in E. chrysanthemi. However, the major effects of PecS are largely confined to specific genes that could be linked to pathogenicity and to a group of genes concerned with evading host defences. Among the identified targets are the genes encoding plant cell wall degrading enzymes, secretion systems, the genes involved in flagella synthesis, in biosurfactant synthesis, in oxidative stress response as well as genes encoding toxin-like virulence factors such as NipE and Hemolysin-coregulated proteins. Electromobility shift assays and DNAse I footprinting demonstrated that PecS directly interacts with the regulatory regions of five new targets, ahpC, rhlA, nipE, virK, avrL, that define three different functional classes of genes: oxidative stress response genes (ahpC), biosurfactant synthesis gene (rhlA), genes encoding exported proteins related to other plant associated bacteria proteins (nipE, virK, avrL). Based on this work, we propose a pivotal role of PecS in the switch from a saprophytic to a parasitic lifestyle.

2008-10-09 | E-TABM-428 | biostudies-arrayexpress

Biosurfactant-producing from Fruit waste

Project description:Biosurfactant-producing from Fruit waste

| PRJEB47062 | ENA

Project description:Chilean Monkeypox isolated

| PRJNA865735 | ENA

Comparison of genetic differences between Streptomyces scabies and turgidiscabies strains

Project description:Bacteria isolated from potato scab lesions in Finland or northern Sweden were analyzed using microarrays, PCR, and sequencing. Data indicate wide genetic variability in pathogenicity islands among S.turgidiscabies and S.scabies strains.

2010-02-01 | GSE18665 | GEO

METHANOBASE_Patagonia

Project description:Bacteria and Archaea biodiversity in terrestrial ecosystems of Chilean Patagonia

| PRJEB36733 | ENA

Project description:Bifidobacterium longum chilean strains

| PRJNA742412 | ENA