Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Identification of transcription factors involved in the regulation of flowering in Adonis amurensis through combined RNA-seq transcriptomics and iTRAQ proteomics

ABSTRACT: Identification of transcription factors involved in the regulation of flowering in Adonis amurensis through combined RNA-seq transcriptomics and iTRAQ proteomics

PROVIDER: PRJNA521968 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR8567622_1.fastq.gz	Fastqsanger.gz
	SRR8567622_2.fastq.gz	Fastqsanger.gz
	SRR8567623_1.fastq.gz	Fastqsanger.gz
	SRR8567623_2.fastq.gz	Fastqsanger.gz
	SRR8567624_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

Identification of transcription factors involved in the regulation of flowering in Adonis amurensis through combined RNA-seq transcriptomics and iTRAQ proteomics

Project description:Molecular mechanisms of flowering in Adonis amurensis

2019-06-21 | GSE126456 | GEO

Adonis amurensis

Project description:Adonis amurensis overview

| PRJNA738222 | ENA

Adonis amurensis

Project description:Adonis amurensis Transcriptome or Gene expression

| PRJNA510460 | ENA

Identification of Transcription Factors Involved in the Regulation of Flowering in Adonis Amurensis Through Combined RNA-seq Transcriptomics and iTRAQ Proteomics.

Project description:Temperature is one of the most important environmental factors affecting flowering in plants. Adonis amurensis, a perennial herbaceous flower that blooms in early spring in northeast China where the temperature can drop to -15 °C, is an ideal model for studying the molecular mechanisms of flowering at extremely low temperatures. This study first investigated global gene expression profiles at different developmental stages of flowering in A. amurensis by RNA-seq transcriptome and iTRAQ proteomics. Finally, 123 transcription factors (TFs) were detected in both the transcriptome and the proteome. Of these, 66 TFs belonging to 14 families may play a key role in multiple signaling pathways of flowering in A. amurensis. The TFs FAR1, PHD, and B3 may be involved in responses to light and temperature, while SCL, SWI/SNF, ARF, and ERF may be involved in the regulation of hormone balance. SPL may regulate the age pathway. Some members of the TCP, ZFP, MYB, WRKY, and bHLH families may be involved in the transcriptional regulation of flowering genes. The MADS-box TFs are the key regulators of flowering in A. amurensis. Our results provide a direction for understanding the molecular mechanisms of flowering in A. amurensis at low temperatures.

| S-EPMC6523232 | biostudies-literature

Lepidarchus adonis

Project description:Lepidarchus adonis

| PRJNA1081317 | ENA

Adonis annua

Project description:Adonis annua overview

| PRJNA1139932 | ENA

iTRAQ-based Quantitative Proteomics Analysis Screen for Critical Proteins during Temperature-Responsive Flowering of Crocus sativus

Project description:To uncover the underlying mechanism of temperature-responsive flowering in Crocus sativus and unveil flowering regulatory proteins, iTRAQ (isobaric tags for relative or absolute quantitation)-based proteomics were applied to study the differences in protein expression profiles in flowering and non-flowering saffron grown at room- and low-temperatures, respectively. A total of 5,624 proteins were identified，and 201 proteins showed differential accumulations between the flowering and non-flowering groups.

2021-09-09 | PXD021020 | Pride

Falco amurensis

Project description:Falco amurensis

| PRJNA959081 | ENA

Tilia amurensis

Project description:Tilia amurensis overview

| PRJNA975237 | ENA

Asterias amurensis

Project description:Asterias amurensis overview

| PRJNA266565 | ENA