Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Athalia japonica sequencing

PROVIDER: PRJNA530049 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR8820522_1.fastq.gz	Fastqsanger.gz
	SRR8820522_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

Athalia japonica

Project description:Athalia japonica overview

| PRJNA898041 | ENA

Athalia japonica

Project description:Athalia japonica Genome sequencing and assembly

| PRJNA845954 | ENA

Project description:Mitochondrial genome of Korean Athalia japonica

| PRJNA1081844 | ENA

De novo Assembly and Characterization of Swertia japonica Transcriptome for the Identification of Candidate Genes Involved in the Biosynthesis of Therapeutic Metabolites

Project description:Here, we performed deep transcriptome sequencing for the aerial-tissues and the roots of S. japonica, generating over 2 billion raw reads with an average length of 101 nt by using an Illumina paired-end sequencing by HiSeq2000 platform. Using a combined approach of three popular assemblers, de novo transcriptome assembly for S. japonica was obtained, yielding in 81,729 unigenes with an average length as 884bps and N50-value as 1,452bps, with 46,963 unigenes being annotated based on the sequence similarity against NCBI-nr protein database. Transcriptome profiling of the aerial-tissues and the roots of Swertia japonica

2016-07-01 | E-GEOD-80057 | biostudies-arrayexpress

iyAthCirc

Project description:Athalia circularis

| PRJEB65233 | ENA

iyAthCord

Project description:Athalia cordata

| PRJEB55966 | ENA

ChIP-seq of holocentric Chionographis japonica to determine the centromere distribution and genome organization

Project description:To determine the distribution of centromere units in the genome of holocentric Chionographis japonica, we performed CENH3-ChIPseq using the customized species-specific CENH3 antibody. We mixed the chromatins of C. japonica and Secale cereal (inbred line Lo7) to dilute the highly abundant centromeric Chio satellite repeats (16%) in the C. japonica genome before immunoprecipitation. In addition, to determine the large-scale genome organization, we performed ChIPseq by targeting the evolutionarily conserved eu- and heterochromatin-specific histone marks H3K4me2 and H33K9me2

2023-05-08 | GSE228407 | GEO

De novo Assembly and Characterization of Swertia japonica Transcriptome for the Identification of Candidate Genes Involved in the Biosynthesis of Therapeutic Metabolites

2016-07-01 | GSE80057 | GEO

Athalia arunachalensis

Project description:Athalia arunachalensis overview

| PRJNA898033 | ENA

Athalia birmanica

Project description:Athalia birmanica overview

| PRJNA898034 | ENA