Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Bacterial community data in Yuan River, Jiangxi Province

PROVIDER: PRJNA540017 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR8980540_1.fastq.gz	Fastqsanger.gz
	SRR8980540_2.fastq.gz	Fastqsanger.gz
	SRR8980550_1.fastq.gz	Fastqsanger.gz
	SRR8980550_2.fastq.gz	Fastqsanger.gz
	SRR8980570_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 64

Similar Datasets

Alternative polyadenylation contributes to the Resistance of the Jiangxi hybrid rice to blast rice using transcriptomics and metabolomics

Project description:Rice (Oryza sativa) is one of the world's major rations. The widely planted hybrid rice in Jiangxi Province is seriously affected by Magnaporthe oryzae, which seriously restricts the rice yield in Jiangxi Province. In recent years, studies have found that alternative polyadenylation (APA) is an important post-transcriptional regulation in eukaryotes. The genetic law and function of APA in the occurrence of hybrid rice blast in Jiangxi are not clear. In this study, Wufengyou T025 (WFY) and its parents (male parent Changhui T025(CH), and female parent Wufeng B(WFB)) were used as the research objects. Transcriptome and metabolome sequencing, combined with a variety of bioinformatics analysis methods and modern molecular biology experimental techniques, revealed the APA expression profile during the occurrence of Jiangxi hybrid rice blast. To explore the regulatory mechanism of APA core factors during the occurrence of rice blast. This study not only provides a new understanding of the occurrence of Jiangxi hybrid rice blast, but also provides more abundant resources for molecular breeding.

2024-07-17 | GSE272164 | GEO

Project description:Bacterial community and Landuse of Yuan river

| PRJNA901368 | ENA

Project description:Bacterial community diversity in the Yuan River Basin

| PRJNA744725 | ENA

Study of microbial functional structure in Xiangjiang River sediment

Project description:Xiangjiang River (Hunan, China) has been contaminated with heavy metal for several decades by surrounding factories. However, little is known about the influence of a gradient of heavy metal contamination on the diversity, structure of microbial functional gene in sediment. To deeply understand the impact of heavy metal contamination on microbial community, a comprehensive functional gene array (GeoChip 5.0) has been used to study the functional genes structure, composition, diversity and metabolic potential of microbial community from three heavy metal polluted sites of Xiangjiang River.

2016-08-02 | GSE85064 | GEO

Soil bacterial community in Yellow River Delta of Shandong Province, China

Project description:Soil bacterial community in Yellow River Delta of Shandong Province, China Targeted loci environmental

| PRJNA483529 | ENA

Spatial transcriptome uncovers rich coordination of metabolism and signaling in bacterial community (data 2)

Project description:Spatial transcriptome uncovers rich coordination of metabolism and signaling in bacterial community (data 2)

2023-03-01 | GSE213531 | GEO

Project description:Microbial community composition in Fu River in Hebei province

| PRJNA811317 | ENA

Study of microbial functional structure in Xiangjiang River sediment

2016-08-02 | E-GEOD-85064 | biostudies-arrayexpress

Project description:soil bacterial and fungal community in Neimeng Province

| PRJNA1076183 | ENA

A study to investigate the effects of long-term organic and integrated fertilization on soil microbial community

Project description:Microbes play key roles in diverse biogeochemical processes including nutrient cycling. However, responses of soil microbial community at the functional gene level to long-term fertilization, especially integrated fertilization (chemical combined with organic fertilization) remain unclear. Here we used microarray-based GeoChip techniques to explore the shifts of soil microbial functional community in a nutrient-poor paddy soil with long-term (21 years).The long-term fertilization experiment site (set up in 1990) was located in Taoyuan agro-ecosystem research station (28°55’N, 111°27’E), Chinese Academy of Sciences, Hunan Province, China, with a double-cropped rice system. fertilization at various regimes.

2020-09-19 | GSE104014 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data